RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ZNF32P17041 273 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 APEX1P27695 318 aaKnown RBP11.17□□□□□ -0.62
NPAS3-209ENST00000551008 IL2RGP31785 369 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 CTXN1P60606 82 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 RIN1Q13671 783 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 SEC23BQ15437 767 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 CARTPTQ16568 116 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 TMPRSS11FQ6ZWK6 438 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 SLC16A14Q7RTX9 510 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 FAM122BQ7Z309 247 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 ARIH2OSQ8N7S6 290 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 NEU4Q8WWR8 484 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-209ENST00000551008 NSMAFQ92636 917 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 GTF3AQ92664 365 aaKnown RBP11.17□□□□□ -0.62
NPAS3-209ENST00000551008 MSI2Q96DH6 328 aaKnown RBP11.17□□□□□ -0.62
NPAS3-209ENST00000551008 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 DYNLRB1Q9NP97 96 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 MYOZ1Q9NP98 299 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-209ENST00000551008 ARL8BQ9NVJ2 186 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 SLC7A8Q9UHI5 535 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 FBXL3Q9UKT7 428 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 ADAM18Q9Y3Q7 739 aa11.17□□□□□ -0.62
NPAS3-209ENST00000551008 IGLV3-9A0A075B6K5 115 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 LOC100509620A0A075B734 347 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 LRP5LA4QPB2 252 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 HTR3EA5X5Y0 456 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 EFCAB9A8MZ26 197 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 H7C1C5 153 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 M0R233 179 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 GSTA4O15217 222 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 DIRAS1O95057 198 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 HPXP02790 462 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 TACSTD2P09758 323 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 SAGP10523 405 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-209ENST00000551008 IGFBP5P24593 272 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 WNT5AP41221 380 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 OMPP47874 163 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF84P51523 738 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 LCN6P62502 163 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ERVK-25P63136 954 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 CD47Q08722 323 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ENDOGQ14249 297 aaKnown RBP11.16□□□□□ -0.62
NPAS3-209ENST00000551008 TAF11Q15544 211 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 TRIP10Q15642 601 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 MESTQ5EB52 335 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 PABPC1L2AQ5JQF8 200 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 PODNL1Q6PEZ8 512 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 THSD4Q6ZMP0 1018 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 HDDC2Q7Z4H3 204 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 PIGWQ7Z7B1 504 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF101Q8IZC7 436 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 RNF113BQ8IZP6 322 aaKnown RBP11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF786Q8N393 782 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 YIPF5Q969M3 257 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 POM121L2Q96KW2 1035 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 Q96M85 177 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 GPA33Q99795 319 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 WNT5BQ9H1J7 359 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 OR51B6Q9H340 312 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 ANKRD19PQ9H560 264 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 SIAEQ9HAT2 523 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 DCAF13Q9NV06 445 aaKnown RBP11.16□□□□□ -0.62
NPAS3-209ENST00000551008 CD300AQ9UGN4 299 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
NPAS3-209ENST00000551008 A0A1W2PRQ8 180 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 PTP4A3O75365 173 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF250P15622 560 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF23P17027 643 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-209ENST00000551008 MSX2P35548 267 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-209ENST00000551008 PSG4Q00888 419 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 DGCR6Q14129 220 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 SLC36A2Q495M3 483 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 FAM27BQ5VT28 67 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 GLYATQ6IB77 296 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 TMEM53Q6P2H8 277 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 UGT2A3Q6UWM9 527 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 FKBP9P1Q75LS8 142 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 DPPA2Q7Z7J5 298 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 OAFQ86UD1 273 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 AKR7LQ8NHP1 331 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 UBASH3BQ8TF42 649 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 FAM46AQ96IP4 442 aaKnown RBP11.15□□□□□ -0.62
NPAS3-209ENST00000551008 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 RNF121Q9H920 327 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 TMEM160Q9NX00 188 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 STX18Q9P2W9 335 aaKnown RBP11.15□□□□□ -0.62
NPAS3-209ENST00000551008 REV1Q9UBZ9 1251 aa11.15□□□□□ -0.62
NPAS3-209ENST00000551008 SIGLEC7Q9Y286 467 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms