RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DPY30Q9C005 99 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 LAT2Q9GZY6 243 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CENPHQ9H3R5 247 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 EXOSC3Q9NQT5 275 aaKnown RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 CTPS2Q9NRF8 586 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 ACER3Q9NUN7 267 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 C6orf203Q9P0P8 240 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-214ENST00000550893 B3GAT1Q9P2W7 334 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 OSGIN1Q9UJX0 560 aa4.23□□□□□ -1.73
SCAF11-214ENST00000550893 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF264O43296 627 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 EIF4E2O60573 245 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 EDF1O60869 148 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 STX11O75558 287 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 SERPINI2O75830 405 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 CPSF4O95639 269 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ADAP00813 363 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 DANCRP0C864 163 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 GKN3PP0CG01 181 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 PSMB1P20618 241 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 IGHV1-2P23083 117 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 C21orf33P30042 268 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 CPOXP36551 454 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 RPL3P39023 403 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 OR3A2P47893 321 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 KHKP50053 298 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ERVFC1-1P60608 527 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 HOXC5Q00444 222 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 MYBPHQ13203 477 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 SELENBP1Q13228 472 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ZNHIT3Q15649 155 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TAB1Q15750 504 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 VPS26BQ4G0F5 336 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 HBMQ6B0K9 141 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 SPSB3Q6PJ21 355 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ENPP6Q6UWR7 440 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 C6orf89Q6UWU4 347 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 LRRC74BQ6ZQY2 392 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 MSANTD1Q6ZTZ1 278 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 SPATA19Q7Z5L4 167 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 NET1Q7Z628 596 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TSEN54Q7Z6J9 526 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 MISPQ8IVT2 679 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 EID3Q8N140 333 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ST8SIA1Q92185 356 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 THOC1Q96FV9 657 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TMEM19Q96HH6 336 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 GMPPAQ96IJ6 420 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TXNDC15Q96J42 360 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 DACH2Q96NX9 599 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TRNT1Q96Q11 434 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 OR52E6Q96RD3 313 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 PIGMQ9H3S5 423 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 TPT1P8Q9HAU6 139 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 C3orf14Q9HBI5 128 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 BCL2L10Q9HD36 194 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 A4GALTQ9NPC4 353 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 POLE3Q9NRF9 147 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ATAD3AQ9NVI7 634 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 EIF3LQ9Y262 564 aaKnown RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF443Q9Y2A4 671 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-214ENST00000550893 WDR45Q9Y484 360 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
SCAF11-214ENST00000550893 A0A096LPI6 279 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 DPRXA6NFQ7 191 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 TUBAL3A6NHL2 446 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 SHISA9B4DS77 424 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 TRAF3IP2O43734 574 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 SLC25A17O43808 307 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF432O94892 652 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 PGM3O95394 542 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 AK1P00568 194 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 HPRP00739 348 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 CSTAP01040 98 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 CD8AP01732 235 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 BCHEP06276 602 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 SOD3P08294 240 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 IDO1P14902 403 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 PAX1P15863 534 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 GPX2P18283 190 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 S100A3P33764 101 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 KRT20P35900 424 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 ATP4BP51164 291 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 POLR2JP52435 117 aaKnown RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 CLNS1AP54105 237 aaKnown RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 PSMD4P55036 377 aaKnown RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 TUBA1BP68363 451 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 KCNJ10P78508 379 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 DMTNQ08495 405 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 BNIP2Q12982 314 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 MAD2L1Q13257 205 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 RGNQ15493 299 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 PGGHGQ32M88 737 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM176BQ3YBM2 270 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-214ENST00000550893 SYT14P1Q58G82 188 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 PHYHD1Q5SRE7 291 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 HHATQ5VTY9 493 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 C11orf71Q6IPW1 123 aa4.21□□□□□ -1.74
SCAF11-214ENST00000550893 C3orf33Q6P1S2 294 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms