RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FGFBP3Q8TAT2 258 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 SNX18Q96RF0 628 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 TPK1Q9H3S4 243 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 C20orf141Q9NUB4 165 aa9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEFF2Q9UIK5 374 aaPredicted RBP9.34□□□□□ -0.91
VTI1BP3-201ENST00000550220 C17orf100A8MU93 164 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 GSTA4O15217 222 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 AHCYL1O43865 530 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 IGHMP01871 453 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TFP02787 698 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 IGFBP1P08833 259 aaPredicted RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 MMP7P09237 267 aaPredicted RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 SAGP10523 405 aaPredicted RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 IFI30P13284 250 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TNFRSF1BP20333 461 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 DRD4P21917 467 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TUBG1P23258 451 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 STOMP27105 288 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 LIPAP38571 399 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 DVL1P1P54792 670 aaPredicted RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 CDH15P55291 814 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 RPL27P61353 136 aaKnown RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 RUNX1T1Q06455 604 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 CD47Q08722 323 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 CR1LQ2VPA4 569 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 ELFN2Q5R3F8 820 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 ARL9Q6T311 187 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 RRM2BQ7LG56 351 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 CYP4Z1Q86W10 505 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 OFCC1Q8IZS5 231 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 LRRC18Q8N456 261 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 ARIH2OSQ8N7S6 290 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 CPEB3Q8NE35 698 aaKnown RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 GEMIN6Q8WXD5 167 aaKnown RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 MED4Q9NPJ6 270 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TAAR3PQ9P1P4 343 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 A4GNTQ9UNA3 340 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 TIMM10BQ9Y5J6 103 aa9.33□□□□□ -0.92
VTI1BP3-201ENST00000550220 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SHOX2O60902 331 aaPredicted RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 HPXP02790 462 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 FAM157BP0CG42 384 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 NAT2P11245 290 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 TCN1P20061 433 aaPredicted RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 COL8A2P25067 703 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 GCH1P30793 250 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 GDI2P50395 445 aaKnown RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SEC24CP53992 1094 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 CTXN1P60606 82 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 MYBPC1Q00872 1141 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 LIPEQ05469 1076 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 PRKCDQ05655 676 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SGCAQ16586 387 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF718Q3SXZ3 478 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 IFI44LQ53G44 452 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 PABPC1L2AQ5JQF8 200 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SLC25A47Q6Q0C1 308 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 HACD2Q6Y1H2 254 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 FKBP9P1Q75LS8 142 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SYT9Q86SS6 491 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 OAFQ86UD1 273 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 GLCCI1Q86VQ1 547 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 LRP11Q86VZ4 500 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 SLC15A3Q8IY34 581 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 FAM156AQ8NDB6 213 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 MOSPD2Q8NHP6 518 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 ACOT11Q8WXI4 607 aaPredicted RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 HDAC2Q92769 488 aaKnown RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 RCN3Q96D15 328 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 NMD3Q96D46 503 aaKnown RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 ANKRD19PQ9H560 264 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 CYSLTR2Q9NS75 346 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 DECR2Q9NUI1 292 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 CMTM6Q9NX76 183 aa9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 CGGBP1Q9UFW8 167 aaPredicted RBP9.32□□□□□ -0.92
VTI1BP3-201ENST00000550220 PLSCR5A0PG75 271 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 C12orf71A8MTZ7 269 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 H3BSA7 217 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CXCR6O00574 342 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 GMNNO75496 209 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 SLC2A10O95528 541 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 IGHV3-13P01766 116 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CST2P09228 141 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 COX4I1P13073 169 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CCL2P13500 99 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ZNF32P17041 273 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CCNOP22674 350 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 SRP14P37108 136 aaKnown RBP9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 CRYBB2P43320 205 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 ARHGDIAP52565 204 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 GUCY1A3Q02108 690 aa9.31□□□□□ -0.92
VTI1BP3-201ENST00000550220 MAD2L1BPQ15013 274 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms