RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CYR61O00622 381 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 SLC26A5P58743 744 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 AADACL4Q5VUY2 407 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 LINC00299Q6ZSB3 139 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 SLC22A18ASQ8N1D0 253 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 PRR18Q8N4B5 295 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 PIGCQ92535 297 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 LAT2Q9GZY6 243 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 ACAD8Q9UKU7 415 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 DVL2O14641 736 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 PEX14O75381 377 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 CSF1P09603 554 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 GNRHRP30968 328 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 ZNF117Q03924 483 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 TOMM34Q15785 309 aaPredicted RBP13.63□□□□□ -0.23
CUX1-214ENST00000550008 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 AAED1Q7RTV5 226 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 OR56B4Q8NH76 319 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 TAS2R4Q9NYW5 299 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 CES1P1Q9UKY3 287 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 FLVCR2Q9UPI3 526 aa13.63□□□□□ -0.23
CUX1-214ENST00000550008 DICER1Q9UPY3 1922 aaKnown RBP13.63□□□□□ -0.23
CUX1-214ENST00000550008 ARPC4-TTLL3A0A0A6YYG9 625 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 B4DXG7 233 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 SC5DO75845 299 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 HTR5AP47898 357 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 UBE2MP61081 183 aaKnown RBP13.62□□□□□ -0.23
CUX1-214ENST00000550008 FOXF1Q12946 379 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 IDO2Q6ZQW0 420 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CPEB2Q7Z5Q1 589 aaKnown RBP13.62□□□□□ -0.23
CUX1-214ENST00000550008 PIGTQ969N2 578 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 PELI1Q96FA3 418 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 SLCO1C1Q9NYB5 712 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 B3GALT1Q9Y5Z6 326 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ROS1P08922 2347 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 hCG_1807616A0A1W2PRN6 198 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 GJE1A6NN92 205 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 LALBAP00709 142 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 PRKACAP17612 351 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 VAMP2P63027 116 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ARG2P78540 354 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 FMODQ06828 376 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CCDC190Q86UF4 302 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 TAAR8Q969N4 342 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 TXNDC15Q96J42 360 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 BANF2Q9H503 90 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CAMK2AQ9UQM7 478 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 IL13RA1P78552 427 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CMTM4Q8IZR5 234 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CLEC1AQ8NC01 280 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CPNE2Q96FN4 548 aaPredicted RBP13.62□□□□□ -0.23
CUX1-214ENST00000550008 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 LOC107986453A0A1B0GWG9 222 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 RFPL3O75679 317 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 CALCBP10092 127 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ANXA7P20073 488 aaKnown RBP13.62□□□□□ -0.23
CUX1-214ENST00000550008 CDK2P24941 298 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 TNK1Q13470 666 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ZNF74Q16587 644 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 LAIR2Q6ISS4 152 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 MISPQ8IVT2 679 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ERVMER34-1Q9H9K5 563 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 TAS2R3Q9NYW6 316 aa13.62□□□□□ -0.23
CUX1-214ENST00000550008 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
CUX1-214ENST00000550008 APOC1P02654 83 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 BDKRB2P30411 391 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 STK11Q15831 433 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 TMEM71Q6P5X7 295 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 TMEM43Q9BTV4 400 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 MFFQ9GZY8 342 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 FKRPQ9H9S5 495 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 KCNIP3Q9Y2W7 256 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 PRSS37A4D1T9 235 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 FAM166BA8MTA8 275 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 F5H5P2 479 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 HLA-AP01891 365 aaKnown RBP13.61□□□□□ -0.23
CUX1-214ENST00000550008 MSL3P1P0C860 447 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
CUX1-214ENST00000550008 GABREP78334 506 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 AIMP2Q13155 320 aaKnown RBP13.61□□□□□ -0.23
CUX1-214ENST00000550008 Q6ZTK2 550 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 TRAPPC6BQ86SZ2 158 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 MFSD8Q8NHS3 518 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 HAVCR2Q8TDQ0 301 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 CALHM2Q9HA72 323 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 FBXL2Q9UKC9 423 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 APOC3P02656 99 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 POU2F2P09086 479 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 FUT5Q11128 374 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 SLC9A3R2Q15599 337 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 TMEM81Q6P7N7 255 aa13.61□□□□□ -0.23
CUX1-214ENST00000550008 OR2G2Q8NGZ5 317 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms