RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF613Q6PF04 617 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 Q6ZPA2 131 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 C17orf107Q6ZR85 190 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 HDDC2Q7Z4H3 204 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 RBM15BQ8NDT2 890 aaKnown RBP7.22□□□□□ -1.25
TROAP-208ENST00000548817 HIPK4Q8NE63 616 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 OR4K5Q8NGD3 323 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 ST7LQ8TDW4 575 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 SLC26A7Q8TE54 656 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 WFDC12Q8WWY7 111 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 TMEM54Q969K7 222 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 SLC25A28Q96A46 364 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 SPDL1Q96EA4 605 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 ELMOD3Q96FG2 381 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 SLC25A44Q96H78 314 aaPredicted RBP7.22□□□□□ -1.25
TROAP-208ENST00000548817 ZNF75AQ96N20 296 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 SH3GL3Q99963 347 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 TMPRSS13Q9BYE2 586 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 EGLN1Q9GZT9 426 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 TMEM38AQ9H6F2 299 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 TCF7L2Q9NQB0 619 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 TMEM38BQ9NVV0 291 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 NKIRAS2Q9NYR9 191 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 PDP1Q9P0J1 537 aaPredicted RBP7.22□□□□□ -1.25
TROAP-208ENST00000548817 EIF3KQ9UBQ5 218 aaKnown RBP7.22□□□□□ -1.25
TROAP-208ENST00000548817 USH1CQ9Y6N9 552 aa7.22□□□□□ -1.25
TROAP-208ENST00000548817 A0A1W2PRG6 482 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ISPDA4D126 451 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CPSF4LA6NMK7 179 aaKnown RBP7.21□□□□□ -1.26
TROAP-208ENST00000548817 CHP2O43745 196 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 RP2O75695 350 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 TGDSO95455 350 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CCL2P13500 99 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZNF250P15622 560 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CCNOP22674 350 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 GUCA1AP43080 201 aaPredicted RBP7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZNF81P51508 661 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 SLC18A1P54219 525 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZP4Q12836 540 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CYP51A1Q16850 503 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZNF718Q3SXZ3 478 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 TNFAIP8L3Q5GJ75 292 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZNF362Q5T0B9 420 aaPredicted RBP7.21□□□□□ -1.26
TROAP-208ENST00000548817 LRIF1Q5T3J3 769 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 BLOC1S3Q6QNY0 202 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 EPGNQ6UW88 154 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 USP51Q70EK9 711 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 NANOGNBQ7Z5D8 188 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 SMYD1Q8NB12 490 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 C11orf65Q8NCR3 313 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 OR1J1Q8NGS3 322 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 DVL3Q92997 716 aaPredicted RBP7.21□□□□□ -1.26
TROAP-208ENST00000548817 MPP4Q96JB8 637 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CITED1Q99966 193 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 GAL3ST1Q99999 423 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 C7orf69Q9H7B7 122 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 SAP30LQ9HAJ7 183 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CCNB1IP1Q9NPC3 277 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 ZNF224Q9NZL3 707 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 CCDC167Q9P0B6 97 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 STX18Q9P2W9 335 aaKnown RBP7.21□□□□□ -1.26
TROAP-208ENST00000548817 KLHL21Q9UJP4 597 aa7.21□□□□□ -1.26
TROAP-208ENST00000548817 IGLV3-9A0A075B6K5 115 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 TRAPPC13A5PLN9 417 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 BLOC1S5-TXNDC5H3BN57 136 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 M0QX08 132 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 M0R3H8 397 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 KPNA4O00629 521 aaPredicted RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 SNAP29O95721 258 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 KNG1P01042 644 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 NR2C1P13056 603 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 GPX2P18283 190 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 CD247P20963 164 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 MDKP21741 143 aaPredicted RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 LIPAP38571 399 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 GDI2P50395 445 aaKnown RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 GLO1Q04760 184 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 MELKQ14680 651 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 ZNF74Q16587 644 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 NRN1LQ496H8 165 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 AGKQ53H12 422 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 ENTPD8Q5MY95 495 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 KPRPQ5T749 579 aaPredicted RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 LRFN4Q6PJG9 635 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 NHLRC1Q6VVB1 395 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 PATL1Q86TB9 770 aaKnown RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 ZNF584Q8IVC4 421 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 SLC30A8Q8IWU4 369 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 C1orf174Q8IYL3 243 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 ALDH16A1Q8IZ83 802 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 LRRC18Q8N456 261 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 SIGLECL1Q8N7X8 197 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 FGFBP3Q8TAT2 258 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 CCL17Q92583 94 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 RBM4BQ9BQ04 359 aaKnown RBP7.2□□□□□ -1.26
TROAP-208ENST00000548817 SLC19A3Q9BZV2 496 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 RABEP2Q9H5N1 569 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 SLCO1B3Q9NPD5 702 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 CYSLTR2Q9NS75 346 aa7.2□□□□□ -1.26
TROAP-208ENST00000548817 TAS2R5Q9NYW4 299 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms