RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 IDH3BO43837 385 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SLC43A1O75387 559 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SMNDC1O75940 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
APP-217ENST00000548570 CLDN1O95832 211 aa4.38□□□□□ -1.71
APP-217ENST00000548570 BPNT1O95861 308 aa4.38□□□□□ -1.71
APP-217ENST00000548570 IGHG1P01857 330 aa4.38□□□□□ -1.71
APP-217ENST00000548570 CPEP16870 476 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SPI1P17947 270 aa4.38□□□□□ -1.71
APP-217ENST00000548570 IGFBP2P18065 325 aa4.38□□□□□ -1.71
APP-217ENST00000548570 CHRNB4P30926 498 aa4.38□□□□□ -1.71
APP-217ENST00000548570 CDAP32320 146 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PYCR1P32322 319 aa4.38□□□□□ -1.71
APP-217ENST00000548570 CSNK1A1P48729 337 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PCYT1AP49585 367 aa4.38□□□□□ -1.71
APP-217ENST00000548570 DAP3P51398 398 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 SMSP52788 366 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SLC25A1P53007 311 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PER3P56645 1201 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ARF1P84077 181 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 ROR2Q01974 943 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 CD47Q08722 323 aa4.38□□□□□ -1.71
APP-217ENST00000548570 FAPQ12884 760 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SMN1Q16637 294 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 MEP1BQ16820 701 aa4.38□□□□□ -1.71
APP-217ENST00000548570 CEACAM16Q2WEN9 425 aa4.38□□□□□ -1.71
APP-217ENST00000548570 HIKESHIQ53FT3 197 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SLC25A30Q5SVS4 291 aa4.38□□□□□ -1.71
APP-217ENST00000548570 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
APP-217ENST00000548570 C9orf135Q5VTT2 229 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ZNF691Q5VV52 312 aa4.38□□□□□ -1.71
APP-217ENST00000548570 GTF2IRD2BQ6EKJ0 949 aa4.38□□□□□ -1.71
APP-217ENST00000548570 RPL13AP3Q6NVV1 102 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PLBD1Q6P4A8 553 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ADCK1Q86TW2 530 aa4.38□□□□□ -1.71
APP-217ENST00000548570 GTF2IRD2Q86UP8 949 aa4.38□□□□□ -1.71
APP-217ENST00000548570 MYPOPQ86VE0 399 aaPredicted RBP4.38□□□□□ -1.71
APP-217ENST00000548570 CXorf67Q86X51 503 aaPredicted RBP4.38□□□□□ -1.71
APP-217ENST00000548570 CPOQ8IVL8 374 aa4.38□□□□□ -1.71
APP-217ENST00000548570 MCEMP1Q8IX19 187 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SKA3Q8IX90 412 aa4.38□□□□□ -1.71
APP-217ENST00000548570 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
APP-217ENST00000548570 OR52L1Q8NGH7 329 aa4.38□□□□□ -1.71
APP-217ENST00000548570 OR51L1Q8NGJ5 315 aa4.38□□□□□ -1.71
APP-217ENST00000548570 OR1K1Q8NGR3 316 aa4.38□□□□□ -1.71
APP-217ENST00000548570 TMEM163Q8TC26 289 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SMAP2Q8WU79 429 aaPredicted RBP4.38□□□□□ -1.71
APP-217ENST00000548570 SGCDQ92629 289 aa4.38□□□□□ -1.71
APP-217ENST00000548570 NSMAFQ92636 917 aa4.38□□□□□ -1.71
APP-217ENST00000548570 BCL2L2Q92843 193 aaPredicted RBP4.38□□□□□ -1.71
APP-217ENST00000548570 ZNF566Q969W8 418 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ADAD1Q96M93 576 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 RDH12Q96NR8 316 aa4.38□□□□□ -1.71
APP-217ENST00000548570 MUS81Q96NY9 551 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SNX18Q96RF0 628 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ZNF649Q9BS31 505 aa4.38□□□□□ -1.71
APP-217ENST00000548570 RHNO1Q9BSD3 238 aa4.38□□□□□ -1.71
APP-217ENST00000548570 TACO1Q9BSH4 297 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 SLCO5A1Q9H2Y9 848 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PIGMQ9H3S5 423 aa4.38□□□□□ -1.71
APP-217ENST00000548570 WDR76Q9H967 626 aa4.38□□□□□ -1.71
APP-217ENST00000548570 MARCH7Q9H992 704 aa4.38□□□□□ -1.71
APP-217ENST00000548570 ZNF556Q9HAH1 456 aa4.38□□□□□ -1.71
APP-217ENST00000548570 RPRD1BQ9NQG5 326 aaKnown RBP4.38□□□□□ -1.71
APP-217ENST00000548570 TMEM38BQ9NVV0 291 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PARPBPQ9NWS1 579 aa4.38□□□□□ -1.71
APP-217ENST00000548570 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
APP-217ENST00000548570 B3GNT2Q9NY97 397 aa4.38□□□□□ -1.71
APP-217ENST00000548570 TVP23BQ9NYZ1 205 aa4.38□□□□□ -1.71
APP-217ENST00000548570 UBAP1Q9NZ09 502 aa4.38□□□□□ -1.71
APP-217ENST00000548570 KIF17Q9P2E2 1029 aa4.38□□□□□ -1.71
APP-217ENST00000548570 GRHPRQ9UBQ7 328 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PROCRQ9UNN8 238 aa4.38□□□□□ -1.71
APP-217ENST00000548570 BAIAP2Q9UQB8 552 aa4.38□□□□□ -1.71
APP-217ENST00000548570 EMC9Q9Y3B6 208 aa4.38□□□□□ -1.71
APP-217ENST00000548570 MED12Q93074 2177 aa4.38□□□□□ -1.71
APP-217ENST00000548570 SHANK1Q9Y566 2161 aa4.38□□□□□ -1.71
APP-217ENST00000548570 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
APP-217ENST00000548570 A0A096LPE4 126 aa4.37□□□□□ -1.71
APP-217ENST00000548570 A0A1W2PPZ6 126 aa4.37□□□□□ -1.71
APP-217ENST00000548570 A0A1W2PR80 420 aa4.37□□□□□ -1.71
APP-217ENST00000548570 SH3D21A4FU49 640 aa4.37□□□□□ -1.71
APP-217ENST00000548570 TVP23AA6NH52 213 aa4.37□□□□□ -1.71
APP-217ENST00000548570 A6NIZ1 184 aa4.37□□□□□ -1.71
APP-217ENST00000548570 ZNF99A8MXY4 864 aaPredicted RBP4.37□□□□□ -1.71
APP-217ENST00000548570 EEF1E1-BLOC1S5C9J1V9 151 aa4.37□□□□□ -1.71
APP-217ENST00000548570 H0YAE9 185 aa4.37□□□□□ -1.71
APP-217ENST00000548570 DVL2O14641 736 aa4.37□□□□□ -1.71
APP-217ENST00000548570 EEF1E1O43324 174 aaKnown RBP4.37□□□□□ -1.71
APP-217ENST00000548570 TLX2O43763 284 aaPredicted RBP4.37□□□□□ -1.71
APP-217ENST00000548570 AHCYL1O43865 530 aa4.37□□□□□ -1.71
APP-217ENST00000548570 SLC16A7O60669 478 aa4.37□□□□□ -1.71
APP-217ENST00000548570 ENTPD6O75354 484 aa4.37□□□□□ -1.71
APP-217ENST00000548570 LYZL6O75951 148 aa4.37□□□□□ -1.71
APP-217ENST00000548570 CLDN14O95500 239 aa4.37□□□□□ -1.71
APP-217ENST00000548570 CNOT4O95628 575 aaKnown RBP4.37□□□□□ -1.71
APP-217ENST00000548570 HMGN1P05114 100 aa4.37□□□□□ -1.71
APP-217ENST00000548570 MMP7P09237 267 aaPredicted RBP4.37□□□□□ -1.71
APP-217ENST00000548570 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
APP-217ENST00000548570 B4GALT1P15291 398 aa4.37□□□□□ -1.71
APP-217ENST00000548570 PSMB1P20618 241 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms