RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF84P51523 738 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 PPP5CP53041 499 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 GFRA1P56159 465 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 CLDN17P56750 224 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 EIF2B1Q14232 305 aaKnown RBP11.99□□□□□ -0.49
PTCH1-215ENST00000547672 SLC17A1Q14916 467 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 TGIF1Q15583 401 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 HIST3H3Q16695 136 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 SOWAHCQ53LP3 525 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-215ENST00000547672 WIPI1Q5MNZ9 446 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-215ENST00000547672 DDI2Q5TDH0 399 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 LIPNQ5VXI9 398 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 CHMP1BQ7LBR1 199 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 SSX6Q7RTT6 188 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 ZFP62Q8NB50 900 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-215ENST00000547672 OR9K2Q8NGE7 335 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 RPS4Y2Q8TD47 263 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 MRI1Q9BV20 369 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 TPK1Q9H3S4 243 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF703Q9H7S9 590 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-215ENST00000547672 AKIP1Q9NQ31 210 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 DEPPQ9NTK1 212 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 PARPBPQ9NWS1 579 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 GLTPQ9NZD2 209 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 EML6Q6ZMW3 1958 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 FRYLO94915 3013 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 A6NL46 340 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 E9PI62 339 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 SLC43A1O75387 559 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 GLSO94925 669 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 RFPL3SP0C7P2 107 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF12P17014 697 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 SHC1P29353 583 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ETV6P41212 452 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF133P52736 654 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 LSM6P62312 80 aaKnown RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PPIAP62937 165 aaKnown RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PPP3R1P63098 170 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 FOXK1P85037 733 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 CDC20Q12834 499 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 CAMK2DQ13557 499 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF766Q5HY98 468 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 KLHL24Q6TFL4 600 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 FAM109AQ8N4B1 249 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 OR52N5Q8NH56 324 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 GPR148Q8TDV2 347 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 SCMH1Q96GD3 660 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PGLYRP3Q96LB9 341 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 WACQ9BTA9 647 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ABHD6Q9BV23 337 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 TTTY12Q9BZ98 90 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 RNF167Q9H6Y7 350 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ELOVL3Q9HB03 270 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 ACOXLQ9NUZ1 547 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PLA2G3Q9NZ20 509 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 EMC3Q9P0I2 261 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 MRM2Q9UI43 246 aaKnown RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 MCTS1Q9ULC4 181 aaKnown RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 CMAHPQ9Y471 501 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 SIRT4Q9Y6E7 314 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PMF1-BGLAPU3KQ54 211 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 DOCK10Q96BY6 2186 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 PTPRBP23467 1997 aa11.98□□□□□ -0.49
PTCH1-215ENST00000547672 CPAMD8Q8IZJ3 1885 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 TRAV17A0A0B4J275 112 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 A0A0G2JMM0 328 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 A0A1W2PPB8 328 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 A0A1W2PRS3 328 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 TRABD2BA6NFA1 517 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ANKRD61A6NGH8 418 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 CD8B2A6NJW9 211 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 KIR3DP1A8MWS1 328 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 NKX2-8O15522 239 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 RGS5O15539 181 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SLC19A2O60779 497 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 UPK3AO75631 287 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SC5DO75845 299 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 APOC1P02654 83 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 QDPRP09417 244 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 H2BFMP0C1H6 154 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 OR8G3PP0DMU2 310 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 CD8BP10966 210 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 TGFBR1P36897 503 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 EIF1AXP47813 144 aaKnown RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 MEOX1P50221 254 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 CCL11P51671 97 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SUCLG1P53597 346 aaKnown RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 MXD1Q05195 221 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 HNRNPA0Q13151 305 aaKnown RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 DOC2BQ14184 412 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms