RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 SPNP16150 400 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 AZGP1P25311 298 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 APEX1P27695 318 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 SRD5A2P31213 254 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 H3F3AP84243 136 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 EIF2B1Q14232 305 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 RAET1LQ5VY80 246 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 SLC25A47Q6Q0C1 308 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 LRRN1Q6UXK5 716 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 NOXO1Q8NFA2 376 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 OR52N5Q8NH56 324 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 PPP1R14BQ96C90 147 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 THOC3Q96J01 351 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 TIGARQ9NQ88 270 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 ANKRD10Q9NXR5 420 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 NCOR1O75376 2440 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 DOCK10Q96BY6 2186 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 GPR179Q6PRD1 2367 aa13.6□□□□□ -0.23
CALCOCO1-203ENST00000546443 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ACOD1A6NK06 481 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 TMEM212A6NML5 194 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 AQP8O94778 261 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ZNF432O94892 652 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 PGA4P0DJD7 388 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 PGA3P0DJD8 388 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SLC2A2P11168 524 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ZNF823P16415 610 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ELK1P19419 428 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 MAGEB1P43366 347 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 CCR9P51686 369 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 DEFA1P59665 94 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 DEFA3P59666 94 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 Q499Y3 187 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 WDR38Q5JTN6 314 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 KCTD18Q6PI47 426 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 HDDC2Q7Z4H3 204 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 RBP7Q96R05 134 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 GFI1Q99684 422 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 CYSLTR2Q9NS75 346 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SPEGQ15772 3267 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 TRBV5-7A0A0A0MS05 114 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 TMCC2O75069 709 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ZNF254O75437 659 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SRSF10O75494 262 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 CSF3P09919 207 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 EPXP11678 715 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ATF1P18846 271 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SRMP19623 302 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 RAC1P63000 192 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 HIST3H3Q16695 136 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 THEM4Q5T1C6 240 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 AGAP7PQ5VUJ5 663 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 KRT77Q7Z794 578 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 SYT9Q86SS6 491 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 GLB1L2Q8IW92 636 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 PIGQQ9BRB3 760 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 DEPPQ9NTK1 212 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 ABRACLQ9P1F3 81 aa13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 MRPS18CQ9Y3D5 142 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 AK6Q9Y3D8 172 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-203ENST00000546443 FREM3P0C091 2139 aa13.58□□□□□ -0.23
CALCOCO1-203ENST00000546443 ZNF318Q5VUA4 2279 aa13.58□□□□□ -0.23
CALCOCO1-203ENST00000546443 VCANP13611 3396 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 A0A0J9YW62 118 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 TRABD2BA6NFA1 517 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 STMND1H3BQB6 276 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 PDCD5O14737 125 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 IGHG1P01857 330 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 EIF4EP06730 217 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 NPR2P20594 1047 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 CNR1P21554 472 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 CD97P48960 835 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 CYB561P49447 251 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 RIDAP52758 137 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 CLRN1P58418 232 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 CAMK2DQ13557 499 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 POU4F3Q15319 338 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 P2RY14Q15391 338 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 PYDC2Q56P42 97 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 STPG1Q5TH74 334 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 LRRC28Q86X40 367 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 NKD1Q969G9 470 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 ORAI1Q96D31 301 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 COMMD4Q9H0A8 199 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 IL17BQ9UHF5 180 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 LRP12Q9Y561 859 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
CALCOCO1-203ENST00000546443 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms