RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TRIM15Q9C019 465 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 GRHPRQ9UBQ7 328 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 ADAM18Q9Y3Q7 739 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 C2CD3Q4AC94 2353 aa10.28□□□□□ -0.76
YBX3-217ENST00000546164 SLC22A23A1A5C7 686 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 B9A039 149 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 XKRYO14609 159 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 ACOT8O14734 319 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 OR10H3O60404 316 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 TXNDC12O95881 172 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 MMP7P09237 267 aaPredicted RBP10.27□□□□□ -0.77
YBX3-217ENST00000546164 PATE4P0C8F1 98 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 NR4A1P22736 598 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 SDHAP31040 664 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 SERPINF1P36955 418 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 GSSP48637 474 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
YBX3-217ENST00000546164 ADIPOQQ15848 244 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 MESTQ5EB52 335 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 FAM27BQ5VT28 67 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 C1orf94Q6P1W5 598 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 PGM2L1Q6PCE3 622 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 SMARCD3Q6STE5 483 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 THSD4Q6ZMP0 1018 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 DPY19L2P2Q6ZN68 376 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 SLC16A14Q7RTX9 510 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 LINC00471Q8N535 108 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 CLDN22Q8N7P3 220 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 SLC7A6OSQ96CW6 309 aaPredicted RBP10.27□□□□□ -0.77
YBX3-217ENST00000546164 CLPTM1LQ96KA5 538 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 Q96M85 177 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 ZNF570Q96NI8 536 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 THTPAQ9BU02 230 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 BDH2Q9BUT1 245 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 C1orf198Q9H425 327 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
YBX3-217ENST00000546164 TMCC3Q9ULS5 477 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 LYVE1Q9Y5Y7 322 aa10.27□□□□□ -0.77
YBX3-217ENST00000546164 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
YBX3-217ENST00000546164 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 PRSS37A4D1T9 235 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 AQP12BA6NM10 295 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 VSTM5A8MXK1 200 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 NDUFS7O75251 213 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 SNAP29O95721 258 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 PTHP01270 115 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 OR4A8P0C604 315 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 HOXB6P17509 224 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 CDAP32320 146 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 THBS4P35443 961 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 SNTB2Q13425 540 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 KRR1Q13601 381 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 DAG1Q14118 895 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 GK3PQ14409 553 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 RAB39AQ14964 217 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 RFX4Q33E94 735 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 FAM98BQ52LJ0 330 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 TMEM53Q6P2H8 277 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 PGBD2Q6P3X8 592 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 ADCK1Q86TW2 530 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 BIVMQ86UB2 503 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 AQP12AQ8IXF9 295 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 OR4C15Q8NGM1 316 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 NSMAFQ92636 917 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 HTRA1Q92743 480 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 CCDC124Q96CT7 223 aaKnown RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 BTBD10Q9BSF8 475 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 WACQ9BTA9 647 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 PLK3Q9H4B4 646 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 VSX1Q9NZR4 365 aaPredicted RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 GDF2Q9UK05 429 aaPredicted RBP10.26□□□□□ -0.77
YBX3-217ENST00000546164 SPEF1Q9Y4P9 236 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 PMF1-BGLAPU3KQ54 211 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 ARFGEF3Q5TH69 2177 aa10.26□□□□□ -0.77
YBX3-217ENST00000546164 RTTNQ86VV8 2226 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 TEX13CA0A0J9YWL9 993 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 TRIM64A6NGJ6 449 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 TRIM64BA6NI03 449 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 TNFRSF11BO00300 401 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 IMPA2O14732 288 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 ARPC3O15145 178 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 GYG2O15488 501 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 STAMBPO95630 424 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 CST2P09228 141 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 INHBBP09529 407 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 RAP2AP10114 183 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 SLC6A6P31641 620 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 GLRXP35754 106 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 RPS6KA3P51812 740 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 BNIP1Q12981 228 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 TSPAN31Q12999 210 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 CLEC12BQ2HXU8 276 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 ZNF770Q6IQ21 691 aaPredicted RBP10.25□□□□□ -0.77
YBX3-217ENST00000546164 VHLLQ6RSH7 139 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 SLC30A7Q8NEW0 376 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 FANK1Q8TC84 345 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms