RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PABPC1L2AQ5JQF8 200 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 TEX30Q5JUR7 227 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 LIN54Q6MZP7 749 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 TMEM184AQ6ZMB5 413 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OR9A4Q8NGU2 314 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OR8K3Q8NH51 312 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 C16orf52Q8NHV5 167 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 SLC25A28Q96A46 364 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 PTX4Q96A99 478 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ZNF587Q96SQ5 575 aaPredicted RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 NPAS1Q99742 590 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 GABRG3Q99928 467 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 NKX6-2Q9C056 277 aaPredicted RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 CHST6Q9GZX3 395 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 SLC2A8Q9NY64 477 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 COMMD9Q9P000 198 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 CKLFQ9UBR5 152 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 PRODH2Q9UF12 536 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 KCNK7Q9Y2U2 307 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ZNF175Q9Y473 711 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 LAMA3Q16787 3333 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 RAB19A4D1S5 217 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 HRKO00198 91 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 NUDT21O43809 227 aaKnown RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 MTRF1O75570 445 aaKnown RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 CYB5AP00167 134 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 F13BP05160 661 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 CD2P06729 351 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 GP1BAP07359 652 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 CCKBRP32239 447 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 GALNSP34059 522 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 UBE2IP63279 158 aaKnown RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 MC2RQ01718 297 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ROM1Q03395 351 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 EGR4Q05215 589 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 MEF2DQ14814 521 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 SLC17A1Q14916 467 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ATPAF1Q5TC12 328 aaPredicted RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 ARHGAP40Q5TG30 622 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 C11orf87Q6NUJ2 197 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ACOT7LQ6ZUV0 252 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ADGRE4PQ86SQ3 457 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OOSP2Q86WS3 158 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ZNF679Q8IYX0 411 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OR1J4Q8NGS1 313 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 STK35Q8TDR2 534 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 RNF128Q8TEB7 428 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 ELSPBP1Q96BH3 223 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 SLC41A2Q96JW4 573 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OR10A5Q9H207 317 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 UBQLN4Q9NRR5 601 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 HRASLS2Q9NWW9 162 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 TAS2R3Q9NYW6 316 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 CPNE7Q9UBL6 633 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 PURGQ9UJV8 347 aaKnown RBP7.91□□□□□ -1.14
TDP1-204ENST00000545686 CACNA1CQ13936 2221 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 MEGF11A6BM72 1044 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 K7EQS6 105 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 NUPL2O15504 423 aaKnown RBP7.9□□□□□ -1.14
TDP1-204ENST00000545686 AMY2AP04746 511 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 ZNF735P0CB33 412 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 PRKACAP17612 351 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 HTR2CP28335 458 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 CD34P28906 385 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 NTSR1P30989 418 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 PGDP52209 483 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 DHRS2Q13268 280 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 PDSS1Q5T2R2 415 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 PHF19Q5T6S3 580 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 TMEM225Q6GV28 225 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 ZNF615Q8N8J6 731 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 RELL2Q8NC24 303 aaPredicted RBP7.9□□□□□ -1.14
TDP1-204ENST00000545686 OR1J2Q8NGS2 313 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 OR8S1Q8NH09 359 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 DVL3Q92997 716 aaPredicted RBP7.9□□□□□ -1.14
TDP1-204ENST00000545686 PRRT1Q99946 306 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 ULBP3Q9BZM4 244 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 SEMA6CQ9H3T2 930 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 ELOVL3Q9HB03 270 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 PRTFDC1Q9NRG1 225 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 KCNG2Q9UJ96 466 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 MRTO4Q9UKD2 239 aaKnown RBP7.9□□□□□ -1.14
TDP1-204ENST00000545686 DHDHQ9UQ10 334 aa7.9□□□□□ -1.14
TDP1-204ENST00000545686 MEIS3P1A6NDR6 274 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 ZNF736B4DX44 427 aaPredicted RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 H7C1C5 153 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 SCDO00767 359 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 CLDN4O14493 209 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 LDLRAD4O15165 306 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 ZNF264O43296 627 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 SIGLEC6O43699 453 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 IGFBP3P17936 291 aaPredicted RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 ACHEP22303 614 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 HNRNPA2B1P22626 353 aaKnown RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 SLC6A8P48029 635 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 SEC13P55735 322 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 LCN6P62502 163 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms