RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	RPL15	P61313	204 aa	Known RBP	5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SLC25A3	Q00325	362 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	LIPE	Q05469	1076 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SCARB2	Q14108	478 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	NDUFA5	Q16718	116 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	GPAT3	Q53EU6	434 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SMUG1	Q53HV7	270 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	MTX3	Q5HYI7	312 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	RABL3	Q5HYI8	236 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	DEFB121	Q5J5C9	76 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	NCMAP	Q5T1S8	102 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	NPSR1	Q6W5P4	371 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	GLCCI1	Q86VQ1	547 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	CALHM3	Q86XJ0	350 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	OR8H2	Q8N162	312 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	ZNF619	Q8N2I2	560 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	BPIFB2	Q8N4F0	458 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	TEX29	Q8N6K0	151 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	KIR3DL3	Q8N743	410 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	OR52E4	Q8NGH9	312 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	OR10A6	Q8NH74	314 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	PNPT1	Q8TCS8	783 aa	Known RBP	5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SPPL2A	Q8TCT8	520 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	CDS1	Q92903	461 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	TMBIM1	Q969X1	311 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	MCUR1	Q96AQ8	359 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	OMA1	Q96E52	524 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	C16orf58	Q96GQ5	468 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	ZNF583	Q96ND8	569 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	CDRT15	Q96T59	188 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SDF2	Q99470	211 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	KCTD14	Q9BQ13	255 aa	Predicted RBP	5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	KRTAP4-5	Q9BYR2	181 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	TRIM15	Q9C019	465 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	KLHL4	Q9C0H6	718 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	OPN3	Q9H1Y3	402 aa	Predicted RBP	5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	LRMDA	Q9H2I8	198 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	ANKRA2	Q9H9E1	313 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	PROK2	Q9HC23	129 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	SDHAF3	Q9NRP4	125 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	CMTM6	Q9NX76	183 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	CISD1	Q9NZ45	108 aa	Known RBP	5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	DTX4	Q9Y2E6	619 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	WDR45	Q9Y484	360 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	HECTD4	Q9Y4D8	3996 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	DSPP	Q9NZW4	1301 aa		5.81	□□□□□ -1.48
LDHA-223	ENST00000545215	TRGV11	A0A075B6L2	103 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	LOC390937	A0A1W2PQ73	354 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	HTR3E	A5X5Y0	456 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	AGAP5	A6NIR3	686 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	NME4	O00746	187 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	TRIM3	O75382	744 aa	Predicted RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	NCR1	O76036	304 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	LY6H	O94772	140 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	PGM3	O95394	542 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	H6PD	O95479	791 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ATP6V1G2	O95670	118 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	BCHE	P06276	602 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	DBI	P07108	87 aa	Known RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	LYL1	P12980	280 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ME2	P23368	584 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	OMG	P23515	440 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	CLK1	P49759	484 aa	Known RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	GZMM	P51124	257 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	LARS2	Q15031	903 aa	Known RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ZNF141	Q15928	474 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	LIN52	Q52LA3	116 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	EIPR1	Q53HC9	387 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	NHSL2	Q5HYW2	709 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SLC30A6	Q6NXT4	461 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ZNF440	Q8IYI8	595 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	MICU2	Q8IYU8	434 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	PRR22	Q8IZ63	422 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	CLEC4F	Q8N1N0	589 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SCAI	Q8N9R8	606 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ZNF540	Q8NDQ6	660 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	TOR1AIP2	Q8NFQ8	470 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	OR5D16	Q8NGK9	328 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SLC38A5	Q8WUX1	472 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	RNF138	Q8WVD3	245 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	PIK3R3	Q92569	461 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	RAB8B	Q92930	207 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	TMEM19	Q96HH6	336 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	DUX5	Q96PT3	197 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	ADO	Q96SZ5	270 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	CENPO	Q9BU64	300 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	TBL1XR1	Q9BZK7	514 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	IKZF5	Q9H5V7	419 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	METTL7A	Q9H8H3	244 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	CBLN4	Q9NTU7	201 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	FKBP14	Q9NWM8	211 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	NDUFA13	Q9P0J0	144 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	CD300A	Q9UGN4	299 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	RPUSD1	Q9UJJ7	312 aa	Known RBP	5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SLC35A3	Q9Y2D2	325 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	SLC6A5	Q9Y345	797 aa		5.8	□□□□□ -1.48
LDHA-223	ENST00000545215	NOX1	Q9Y5S8	564 aa		5.8	□□□□□ -1.48

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