RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	RRM2B	Q7LG56	351 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	FAM122B	Q7Z309	247 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	SVOPL	Q8N434	492 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	FAM86B1	Q8N7N1	296 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	SLC30A7	Q8NEW0	376 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	OR1J2	Q8NGS2	313 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	OR13C2	Q8NGS9	318 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	PYURF	Q96I23	114 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	TSPAN32	Q96QS1	320 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	RBP7	Q96R05	134 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	WAC	Q9BTA9	647 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	MRPL37	Q9BZE1	423 aa	Known RBP	11.54	□□□□□ -0.56
POLE-222	ENST00000545015	ARL8B	Q9NVJ2	186 aa		11.54	□□□□□ -0.56
POLE-222	ENST00000545015	ABCA1	O95477	2261 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	INAFM1	C9JVW0	142 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	SYNGR3	O43761	229 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	GPRIN2	O60269	458 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	CRLF1	O75462	422 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	LY6H	O94772	140 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	TP53	P04637	393 aa	Predicted RBP	11.53	□□□□□ -0.56
POLE-222	ENST00000545015	ERCC1	P07992	297 aa	Predicted RBP	11.53	□□□□□ -0.56
POLE-222	ENST00000545015	GIF	P27352	417 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	OMP	P47874	163 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	MNAT1	P51948	309 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	SMIM11A	P58511	58 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	GALK2	Q01415	458 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	PLP2	Q04941	152 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	FMOD	Q06828	376 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	CD47	Q08722	323 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	TMEM249	Q2WGJ8	235 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	C16orf89	Q6UX73	402 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	RNF148	Q8N7C7	305 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	ZNF540	Q8NDQ6	660 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	CDRT15	Q96T59	188 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	VRK1	Q99986	396 aa	Predicted RBP	11.53	□□□□□ -0.56
POLE-222	ENST00000545015	NDEL1	Q9GZM8	345 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	MS4A5	Q9H3V2	200 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	RNF121	Q9H920	327 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	NRIP3	Q9NQ35	241 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	SIGLEC7	Q9Y286	467 aa		11.53	□□□□□ -0.56
POLE-222	ENST00000545015	IGLV3-9	A0A075B6K5	115 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	IQCM	A0A1B0GVH7	501 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	ICMT	O60725	284 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	NDUFB2	O95178	105 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	CST2	P09228	141 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	ZNF250	P15622	560 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	USF1	P22415	310 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-222	ENST00000545015	NR4A2	P43354	598 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	GPR4	P46093	362 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	TOP3A	Q13472	1001 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-222	ENST00000545015	TBC1D28	Q2M2D7	210 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-222	ENST00000545015	GPR139	Q6DWJ6	353 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	SYT9	Q86SS6	491 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	IGFN1	Q86VF2	1251 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	C1orf174	Q8IYL3	243 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	ZNF786	Q8N393	782 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-222	ENST00000545015	NSMCE2	Q96MF7	247 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	CCT8L2	Q96SF2	557 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	PIMREG	Q9BSJ6	248 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	LRMDA	Q9H2I8	198 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	KCNN2	Q9H2S1	579 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.52	□□□□□ -0.57
POLE-222	ENST00000545015	TMEM160	Q9NX00	188 aa		11.52	□□□□□ -0.57
POLE-222	ENST00000545015	TRBV4-1	A0A0J9YWV2	114 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	SH3PXD2B	A1X283	911 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015		M0R233	179 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	ARPC2	O15144	300 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	STAMBP	O95630	424 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	TXNDC12	O95881	172 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	APEH	P13798	732 aa	Known RBP	11.51	□□□□□ -0.57
POLE-222	ENST00000545015	ZNF32	P17041	273 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	TCN1	P20061	433 aa	Predicted RBP	11.51	□□□□□ -0.57
POLE-222	ENST00000545015	SDHA	P31040	664 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	CDA	P32320	146 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	RAD52	P43351	418 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	UCP2	P55851	309 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	FXYD6P3	P58550	94 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	ERVK-25	P63136	954 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	SEC23B	Q15437	767 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	MEST	Q5EB52	335 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	PABPC1L2A	Q5JQF8	200 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	MEX3D	Q86XN8	651 aa	Known RBP	11.51	□□□□□ -0.57
POLE-222	ENST00000545015	DEFB107A	Q8IZN7	70 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	ARHGAP24	Q8N264	748 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	LRRC18	Q8N456	261 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	FITM2	Q8N6M3	262 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	CPEB3	Q8NE35	698 aa	Known RBP	11.51	□□□□□ -0.57
POLE-222	ENST00000545015	NSMAF	Q92636	917 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	FAM46A	Q96IP4	442 aa	Known RBP	11.51	□□□□□ -0.57
POLE-222	ENST00000545015	POM121L2	Q96KW2	1035 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	FOXN4	Q96NZ1	517 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	BCL2L14	Q9BZR8	327 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	CDH20	Q9HBT6	801 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	DYNLRB1	Q9NP97	96 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	CCNB1IP1	Q9NPC3	277 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	IL1RAP	Q9NPH3	570 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	GRHPR	Q9UBQ7	328 aa		11.51	□□□□□ -0.57
POLE-222	ENST00000545015	REV1	Q9UBZ9	1251 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms