RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
DDX11-227ENST00000544652 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
DDX11-227ENST00000544652 NELFAQ9H3P2 528 aa11.49□□□□□ -0.57
DDX11-227ENST00000544652 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
DDX11-227ENST00000544652 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
DDX11-227ENST00000544652 ZNF226Q9NYT6 803 aa11.49□□□□□ -0.57
DDX11-227ENST00000544652 HEATR1Q9H583 2144 aaKnown RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 FAM183AA6NL82 134 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 PRR23D1E9PI22 279 aaPredicted RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 PRODHO43272 600 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 LYZL6O75951 148 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 PRR23D2P0DMB1 279 aaPredicted RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 SPI1P17947 270 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 PAICSP22234 425 aaKnown RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 CCKARP32238 428 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 UGT2B10P36537 528 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 ZNF84P51523 738 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 SNRPGP62308 76 aaKnown RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 SORDQ00796 357 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 TGFBR3Q03167 851 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 C1QTNF12Q5T7M4 302 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 AADACL4Q5VUY2 407 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 NXNL2Q5VZ03 156 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 OR7E24Q6IFN5 339 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 PLBD1Q6P4A8 553 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 IZUMO2Q6UXV1 221 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 CPOQ8IVL8 374 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 C17orf78Q8N4C9 275 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 ZNRF4Q8WWF5 429 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 BCL2L2Q92843 193 aaPredicted RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 UBE2FQ969M7 185 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 LRRC46Q96FV0 321 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 SRA1Q9HD15 236 aaKnown RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 MOKQ9UQ07 419 aa11.48□□□□□ -0.57
DDX11-227ENST00000544652 COA3Q9Y2R0 106 aaPredicted RBP11.48□□□□□ -0.57
DDX11-227ENST00000544652 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 M0R129 80 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 TLX2O43763 284 aaPredicted RBP11.47□□□□□ -0.57
DDX11-227ENST00000544652 MPZL2O60487 215 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 GAAP10253 952 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 CLUP10909 449 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 NPR2P20594 1047 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 LAP3P28838 519 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 HSPA13P48723 471 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 CENPAP49450 140 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 ISL1P61371 349 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 SLC35D3Q5M8T2 416 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 ANKRD16Q6P6B7 361 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 CXXC5Q7LFL8 322 aaKnown RBP11.47□□□□□ -0.57
DDX11-227ENST00000544652 BHLHA15Q7RTS1 189 aaPredicted RBP11.47□□□□□ -0.57
DDX11-227ENST00000544652 GLB1L2Q8IW92 636 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 ENTHD1Q8IYW4 607 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 RHOXF1Q8NHV9 184 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 CYGBQ8WWM9 190 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 NSMAFQ92636 917 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 KISS1RQ969F8 398 aaPredicted RBP11.47□□□□□ -0.57
DDX11-227ENST00000544652 IL4I1Q96RQ9 567 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 APOL4Q9BPW4 351 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 MED20Q9H944 212 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 IMPAD1Q9NX62 359 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 KLF2Q9Y5W3 355 aaPredicted RBP11.47□□□□□ -0.57
DDX11-227ENST00000544652 HSPE1-MOB4S4R3N1 261 aa11.47□□□□□ -0.57
DDX11-227ENST00000544652 CIB4A0PJX0 185 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 RAD51DO75771 328 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 GLCEO94923 617 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 CLIC3O95833 236 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 GYPBP06028 91 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 BLVRAP53004 296 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 HSF2Q03933 536 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 GLO1Q04760 184 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 DBPQ10586 325 aaPredicted RBP11.46□□□□□ -0.57
DDX11-227ENST00000544652 TSC22D1Q15714 1073 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 TBRG1Q3YBR2 411 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 TIMM23BQ5SRD1 257 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 FAM27BQ5VT28 67 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 MEDAGQ5VYS4 303 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 P2RY8Q86VZ1 359 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 SLC22A24Q8N4F4 322 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 ACBD4Q8NC06 268 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 SETD9Q8NE22 299 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 BBS1Q8NFJ9 593 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 STEAP2Q8NFT2 490 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 SLC26A10Q8NG04 563 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 MARCH7Q9H992 704 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 SIAEQ9HAT2 523 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 POLE4Q9NR33 117 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 RAB26Q9ULW5 256 aa11.46□□□□□ -0.57
DDX11-227ENST00000544652 ARPC4-TTLL3A0A0A6YYG9 625 aa11.45□□□□□ -0.58
DDX11-227ENST00000544652 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
DDX11-227ENST00000544652 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
DDX11-227ENST00000544652 OR5H1A6NKK0 313 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms