RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 HRGP04196 525 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 MYL12AP19105 171 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 KLK2P20151 261 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 GSTT1P30711 240 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TIMP3P35625 211 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SLC15A1P46059 708 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 CAPZA2P47755 286 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF133P52736 654 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 NUDT6P53370 316 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ACTC1P68032 377 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ACTA1P68133 377 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TUBA4AP68366 448 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SLC35A2P78381 396 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 GGTLC2Q14390 218 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SMN1Q16637 294 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 HIST3H3Q16695 136 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 C10orf128Q5T292 105 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TMEM211Q6ICI0 200 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF773Q6PK81 442 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 B3GNT6Q6ZMB0 384 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 FAM214BQ7L5A3 538 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 PRSS48Q7RTY5 328 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 GLB1L2Q8IW92 636 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 C20orf196Q8IYI0 205 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF100Q8IYN0 542 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SYT14Q8NB59 555 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 OR6K6Q8NGW6 343 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 MBD3L2Q8NHZ7 208 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 ITLN2Q8WWU7 325 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 TMEM54Q969K7 222 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TMEM80Q96HE8 168 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF385AQ96PM9 386 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 CNN2Q99439 309 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 ULBP2Q9BZM5 246 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 NUAK2Q9H093 628 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 MED20Q9H944 212 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 FGF20Q9NP95 211 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 FKBP14Q9NWM8 211 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 KCNG2Q9UJ96 466 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 FOXD3Q9UJU5 478 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 B9D1Q9UPM9 204 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 ZNF835Q9Y2P0 537 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 TMEM14AQ9Y6G1 99 aa8.42□□□□□ -1.06
YBX3-215ENST00000544504 MAP1AP78559 2803 aaPredicted RBP8.42□□□□□ -1.06
YBX3-215ENST00000544504 NAV3Q8IVL0 2385 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 IGLV1-36A0A0B4J1U3 117 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 CCDC182A6NF36 153 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 H7C1C5 153 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 PHYHO14832 338 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
YBX3-215ENST00000544504 CDK1P06493 297 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 QDPRP09417 244 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 ZNF823P16415 610 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 NPR2P20594 1047 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 AGTR1P30556 359 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 SELENOPP49908 381 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 SH3BGRP55822 239 aaPredicted RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 LCN6P62502 163 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 MVKQ03426 396 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 HSF2Q03933 536 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 ST3GAL4Q11206 333 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 RNLSQ5VYX0 342 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 CARD17Q5XLA6 110 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 LAIR2Q6ISS4 152 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 RPTNQ6XPR3 784 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 AHSA2Q719I0 299 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 SHFQ7M4L6 423 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 FGD2Q7Z6J4 655 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 MRGPRGQ86SM5 289 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 EGFL6Q8IUX8 553 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 TUSC5Q8IXB3 177 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 OR6V1Q8N148 313 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 ZNF808Q8N4W9 903 aaPredicted RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 ACBD7Q8N6N7 88 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 OR10H5Q8NGA6 315 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 OR6K3Q8NGY3 331 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 GGHQ92820 318 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 MCHR2Q969V1 340 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 WACQ9BTA9 647 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 JAM3Q9BX67 310 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 HCAR1Q9BXC0 346 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 MRPS26Q9BYN8 205 aaKnown RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 YIPF3Q9GZM5 350 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 RERGLQ9H628 205 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 MARCH7Q9H992 704 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 AMBNQ9NP70 447 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 UPB1Q9UBR1 384 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 ING1Q9UK53 422 aaPredicted RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 DIMT1Q9UNQ2 313 aaKnown RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 EXOGQ9Y2C4 368 aaKnown RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 EXOSC1Q9Y3B2 195 aaKnown RBP8.41□□□□□ -1.06
YBX3-215ENST00000544504 PCDHGB5Q9Y5G0 923 aa8.41□□□□□ -1.06
YBX3-215ENST00000544504 DIDO1Q9BTC0 2240 aaKnown RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 ZNF587BE7ETH6 402 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 DHHO43323 396 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms