RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ACOD1A6NK06 481 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GJE1A6NN92 205 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 AHRRA9YTQ3 701 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SEC14L5O43304 696 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 WDR1O75083 606 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF682O95780 498 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 LGI1O95970 557 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SERPINA1P01009 418 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CHRM2P08172 466 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CLUP10909 449 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GABRA1P14867 456 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ELK4P28324 431 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 APOBEC1P41238 236 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SLC1A3P43003 542 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 LHX2P50458 406 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 POLR2HP52434 150 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SELENOWP63302 87 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SPIBQ01892 262 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 BNIP2Q12982 314 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CEACAM7Q14002 265 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 C3AR1Q16581 482 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM44Q2T9K0 475 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SLC25A53Q5H9E4 307 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 PDSS1Q5T2R2 415 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 C1QL3Q5VWW1 255 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 HIST2H2BCQ6DN03 193 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 HIST2H2BDQ6DRA6 164 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 Q6ZPB1 254 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GRINAQ7Z429 371 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 DOLPP1Q86YN1 238 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 CHERPQ8IWX8 916 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 UBQLNLQ8IYU4 475 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 STPG3Q8N7X2 389 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GPR32P1Q8NGA4 272 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 OR52E4Q8NGH9 312 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 VANGL1Q8TAA9 524 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 POC1BQ8TC44 478 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 DVL3Q92997 716 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 BSCL2Q96G97 398 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 NPAS1Q99742 590 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ARHGDIGQ99819 225 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GAL3ST1Q99999 423 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF559Q9BR84 538 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 BTBD10Q9BSF8 475 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 THTPAQ9BU02 230 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 RNPEPL1Q9HAU8 725 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM27Q9HBJ8 222 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 GPN1Q9HCN4 374 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TESQ9UGI8 421 aaKnown RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 TINAGQ9UJW2 476 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SH3GLB1Q9Y371 365 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 SPIN1Q9Y657 262 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-217ENST00000543205 FLNCQ14315 2725 aa4.55□□□□□ -1.68
CLIP1-217ENST00000543205 COL12A1Q99715 3063 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CCL21O00585 134 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 LRRTM2O43300 516 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 RHBDL1O75783 438 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 PDE5AO76074 875 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 NTN1O95631 604 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 EPPINO95925 133 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 OPN1LWP04000 364 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 KRT8P05787 483 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 STSP08842 583 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 HOXD4P09016 255 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-217ENST00000543205 INHBBP09529 407 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 STAG3L3P0CL85 134 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 TFPIP10646 304 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CPN1P15169 458 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 GYPEP15421 78 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF708P17019 499 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CXCR1P25024 350 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 FKBP2P26885 142 aaKnown RBP4.54□□□□□ -1.68
CLIP1-217ENST00000543205 TACR3P29371 465 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 SFTPDP35247 375 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 PTGER4P35408 488 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CA7P43166 264 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CRYBA2P53672 197 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CLDN18P56856 261 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 RAP2BP61225 183 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 SELENBP1Q13228 472 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 BCL2A1Q16548 175 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 NRF1Q16656 503 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 VWC2Q2TAL6 325 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM176BQ3YBM2 270 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-217ENST00000543205 Q5PR19 223 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 DCST1Q5T197 706 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 C3orf33Q6P1S2 294 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 C6orf89Q6UWU4 347 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 C3P1Q6ZMU1 363 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 DEF8Q6ZN54 512 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 FJX1Q86VR8 437 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 COMTD1Q86VU5 262 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 CARM1Q86X55 608 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM185AQ8NFB2 350 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 OR10Q1Q8NGQ4 319 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 DNAJA4Q8WW22 397 aaPredicted RBP4.54□□□□□ -1.68
CLIP1-217ENST00000543205 MCUR1Q96AQ8 359 aa4.54□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF524Q96C55 264 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms