RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SPEM1Q8N4L4 309 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 BMPERQ8N8U9 685 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 SHDQ96IW2 340 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 FOXQ1Q9C009 403 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 TTYH1Q9H313 450 aaPredicted RBP5.9□□□□□ -1.47
PTPRO-208ENST00000542557 SLC17A5Q9NRA2 495 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 MRPL22Q9NWU5 206 aaKnown RBP5.9□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF222Q9UK12 451 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 PPIEQ9UNP9 301 aaKnown RBP5.9□□□□□ -1.47
PTPRO-208ENST00000542557 SPEF1Q9Y4P9 236 aa5.9□□□□□ -1.47
PTPRO-208ENST00000542557 TMEM265A0A087WTH1 108 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 A6NIZ1 184 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 AKR7A2O43488 359 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 XRCC3O43542 346 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 KHDRBS3O75525 346 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 FBXO45P0C2W1 286 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 CXCL3P19876 107 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 FSTP19883 344 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 BCKDHBP21953 392 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RAP1BP61224 184 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RAP1AP62834 184 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RNF4P78317 190 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ZP4Q12836 540 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 IKZF1Q13422 519 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 METTL11BQ5VVY1 283 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ANKRD16Q6P6B7 361 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 LRRC69Q6ZNQ3 347 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 LANCL3Q6ZV70 420 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 OR10AC1Q8NH08 325 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 CEP76Q8TAP6 659 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 NUBPLQ8TB37 319 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF431Q8TF32 576 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RNF138Q8WVD3 245 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 C8orf44Q96CB5 159 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SLC25A36Q96CQ1 311 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 MED30Q96HR3 178 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RADILQ96JH8 1075 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF587Q96SQ5 575 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ELOVL3Q9HB03 270 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SLC22A11Q9NSA0 550 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 CTSFQ9UBX1 484 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SCP2D1Q9UJQ7 156 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 A0A1B0GTH9 108 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 ETV2O00321 342 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 GMFGO60234 142 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SLC16A7O60669 478 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 WISP1O95388 367 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 GPANK1O95872 356 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 PLGP00747 810 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 HLA-DQA2P01906 255 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 CTLA4P16410 223 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 HTR2BP41595 481 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RPS27P42677 84 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RIDAP52758 137 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SNRPD2P62316 118 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 RPS15P62841 145 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 GLO1Q04760 184 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 COL28A1Q2UY09 1125 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 TMEM255AQ5JRV8 349 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 MTFR2Q6P444 385 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 DNM1P34Q6PK57 102 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SERPINA12Q8IW75 414 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 PRSS58Q8IYP2 241 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 PLPP7Q8NBV4 271 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 DNAAF1Q8NEP3 725 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 OR51A4Q8NGJ6 313 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 OR52N5Q8NH56 324 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 STT3BQ8TCJ2 826 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 TSEN15Q8WW01 171 aaKnown RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 GCDHQ92947 438 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 SNAPC3Q92966 411 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 DUSP15Q9H1R2 295 aaPredicted RBP5.89□□□□□ -1.47
PTPRO-208ENST00000542557 DIABLOQ9NR28 239 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 TAS2R8Q9NYW2 309 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 WNT16Q9UBV4 365 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 KLK11Q9UBX7 282 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 MGAT4AQ9UM21 535 aa5.89□□□□□ -1.47
PTPRO-208ENST00000542557 GON4LQ3T8J9 2241 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 H7C417 338 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ERVH48-1M5A8F1 160 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SLC17A2O00624 439 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ZNF208O43345 1280 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SSNA1O43805 119 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NDUFB6O95139 128 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MAS1P04201 325 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 IL5P05113 134 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 TPOP07202 933 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 SPARCP09486 303 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CD37P11049 281 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 CPN1P15169 458 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PNLIPP16233 465 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 NAGAP17050 411 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PTGS2P35354 604 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 FAUP35544 74 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 DAP3P51398 398 aaKnown RBP5.88□□□□□ -1.47
PTPRO-208ENST00000542557 MAP2K6P52564 334 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 PRSS12P56730 875 aa5.88□□□□□ -1.47
PTPRO-208ENST00000542557 ZP1P60852 638 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms