RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	CDA	P32320	146 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	RPL4	P36578	427 aa	Known RBP	13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	TNK1	Q13470	666 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	DAG1	Q14118	895 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	SLC36A2	Q495M3	483 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	MEST	Q5EB52	335 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	FAM27B	Q5VT28	67 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	DHFR2	Q86XF0	187 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	FBXO17	Q96EF6	278 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	NDEL1	Q9GZM8	345 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	PLK3	Q9H4B4	646 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	GSX1	Q9H4S2	264 aa	Predicted RBP	13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	MAGIX	Q9H6Y5	334 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	GRHPR	Q9UBQ7	328 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	PMF1-BGLAP	U3KQ54	211 aa		13.35	□□□□□ -0.27
ECHDC2-223	ENST00000542552	C2CD3	Q4AC94	2353 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	RTTN	Q86VV8	2226 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	TMEM129	A0AVI4	362 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	SLC22A23	A1A5C7	686 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	KRT36	O76013	467 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	UBOX5	O94941	541 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	TXNDC12	O95881	172 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	FPR3	P25089	353 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	GSS	P48637	474 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	SNTB2	Q13425	540 aa	Known RBP	13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	RAB35	Q15286	201 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	GPR139	Q6DWJ6	353 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	C1orf94	Q6P1W5	598 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	TMEM53	Q6P2H8	277 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	VHLL	Q6RSH7	139 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	DPY19L2P2	Q6ZN68	376 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	NSMAF	Q92636	917 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	POP5	Q969H6	163 aa	Known RBP	13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	ASB9	Q96DX5	294 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	CLPTM1L	Q96KA5	538 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	SMR3A	Q99954	134 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	AURKC	Q9UQB9	309 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	LYVE1	Q9Y5Y7	322 aa		13.34	□□□□□ -0.27
ECHDC2-223	ENST00000542552	PRSS37	A4D1T9	235 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	VSTM5	A8MXK1	200 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	APEH	P13798	732 aa	Known RBP	13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SDHA	P31040	664 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	GLRX	P35754	106 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	EFNA4	P52798	201 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SNRPD2	P62316	118 aa	Known RBP	13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SGCA	Q16586	387 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	MSMP	Q1L6U9	139 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	KRT80	Q6KB66	452 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	PGM2L1	Q6PCE3	622 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SMARCD3	Q6STE5	483 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	LRRC18	Q8N456	261 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SLC30A7	Q8NEW0	376 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	OR4C15	Q8NGM1	316 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	RASD2	Q96D21	266 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	ZNF570	Q96NI8	536 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	DOK1	Q99704	481 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	THTPA	Q9BU02	230 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	TRIM15	Q9C019	465 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	C1orf198	Q9H425	327 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	RNF121	Q9H920	327 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IL20RA	Q9UHF4	553 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	TMCC3	Q9ULS5	477 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SPEF1	Q9Y4P9	236 aa		13.33	□□□□□ -0.28
ECHDC2-223	ENST00000542552	ANK3	Q12955	4377 aa	Known RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CSPG4	Q6UVK1	2322 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	TEX13C	A0A0J9YWL9	993 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552		H7C1C5	153 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	XKRY	O14609	159 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SSX4	O60224	188 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	OR10H3	O60404	316 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SNAP29	O95721	258 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	F12	P00748	615 aa	Predicted RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SCG5	P05408	212 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CST2	P09228	141 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IFNGR2	P38484	337 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	EVX1	P49640	407 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	LCN6	P62502	163 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	TRAP1	Q12931	704 aa	Known RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	KRR1	Q13601	381 aa	Known RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	RFX4	Q33E94	735 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	PGBD2	Q6P3X8	592 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CPEB3	Q8NE35	698 aa	Known RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	OR10H5	Q8NGA6	315 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	VSX1	Q9NZR4	365 aa	Predicted RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	SLC7A8	Q9UHI5	535 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	FBXO9	Q9UK97	447 aa	Predicted RBP	13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CMAHP	Q9Y471	501 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IER3IP1	Q9Y5U9	82 aa		13.32	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CR1	P17927	2039 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	FAM171A2	A8MVW0	826 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IMPA2	O14732	288 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	ARPC3	O15145	178 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	GPRIN2	O60269	458 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	PTH	P01270	115 aa		13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	IGFBP1	P08833	259 aa	Predicted RBP	13.31	□□□□□ -0.28
ECHDC2-223	ENST00000542552	CTLA4	P16410	223 aa		13.31	□□□□□ -0.28

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