RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 INIPQ9NRY2 104 aa20.44■□□□□ 0.86
LEMD3-203ENST00000541171 SLC2A10O95528 541 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 VIMP08670 466 aaKnown RBP20.43■□□□□ 0.86
LEMD3-203ENST00000541171 MMEL1Q495T6 779 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 NRN1LQ496H8 165 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 SPATA46Q5T0L3 261 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 PEG10Q86TG7 708 aaKnown RBP20.43■□□□□ 0.86
LEMD3-203ENST00000541171 NKAIN4Q8IVV8 208 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 GCDHQ92947 438 aaPredicted RBP20.43■□□□□ 0.86
LEMD3-203ENST00000541171 RAB39BQ96DA2 213 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 SAP30LQ9HAJ7 183 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 SH3GLB1Q9Y371 365 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 WIPI2Q9Y4P8 454 aa20.43■□□□□ 0.86
LEMD3-203ENST00000541171 TENM1Q9UKZ4 2725 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 CLDN25C9JDP6 229 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 SPRY3O43610 288 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 SHOX2O60902 331 aaPredicted RBP20.42■□□□□ 0.86
LEMD3-203ENST00000541171 OR7A10O76100 309 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 MT-ND1P03886 318 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 TNFRSF1BP20333 461 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 ZNF81P51508 661 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 TAS2R41P59536 307 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 SGCAQ16586 387 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 VMACQ2NL98 169 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 HFEQ30201 348 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 MOSPD2Q8NHP6 518 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 TMEM255BQ8WV15 326 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 NSMAFQ92636 917 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 SGTBQ96EQ0 304 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 SIAEQ9HAT2 523 aa20.42■□□□□ 0.86
LEMD3-203ENST00000541171 TRIM77I1YAP6 450 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 IGHV3-13P01766 116 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 MAKP20794 623 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 STOMP27105 288 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 GCH1P30793 250 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 DAP3P51398 398 aaKnown RBP20.41■□□□□ 0.86
LEMD3-203ENST00000541171 CRYBA2P53672 197 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 HILS1P60008 231 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 THEM4Q5T1C6 240 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 HDDC2Q7Z4H3 204 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 TEX29Q8N6K0 151 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 C3orf56Q8N813 242 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 AKR7LQ8NHP1 331 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 RASSF5Q8WWW0 418 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 RAB1CQ92928 201 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 TIMD4Q96H15 378 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 SEPHS2Q99611 448 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 TMPRSS13Q9BYE2 586 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 C20orf141Q9NUB4 165 aa20.41■□□□□ 0.86
LEMD3-203ENST00000541171 A0A0G2JMP0 313 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 A0A0X1KG70 313 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 CENPBD1B2RD01 187 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 DEAF1O75398 565 aaPredicted RBP20.4■□□□□ 0.86
LEMD3-203ENST00000541171 IGHV2-5P01817 119 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 ZNF32P17041 273 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 ADRA2CP18825 462 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 MPV17P39210 176 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 GZMMP51124 257 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 MRPS34P82930 218 aaKnown RBP20.4■□□□□ 0.86
LEMD3-203ENST00000541171 FMODQ06828 376 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 LAPTM4AQ15012 233 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 ZNF718Q3SXZ3 478 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 C10orf128Q5T292 105 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 ZNF101Q8IZC7 436 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 OR4M2Q8NGB6 313 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 CCL17Q92583 94 aa20.4■□□□□ 0.86
LEMD3-203ENST00000541171 EIF3KQ9UBQ5 218 aaKnown RBP20.4■□□□□ 0.86
LEMD3-203ENST00000541171 IGKV1D-43A0A0B4J1Z2 117 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 C5orf49A4QMS7 147 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 IGHV1-46P01743 117 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 WNT5AP41221 380 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 CD47Q08722 323 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 PIN1Q13526 163 aaPredicted RBP20.39■□□□□ 0.85
LEMD3-203ENST00000541171 ARMC4Q5T2S8 1044 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 DCAF12L2Q5VW00 463 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 CCDC80Q76M96 950 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 C1QL2Q7Z5L3 287 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 SLC25A40Q8TBP6 338 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 FAM216AQ8WUB2 273 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 TMEM239Q8WW34 195 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 IPCEF1Q8WWN9 437 aaPredicted RBP20.39■□□□□ 0.85
LEMD3-203ENST00000541171 HDAC2Q92769 488 aaKnown RBP20.39■□□□□ 0.85
LEMD3-203ENST00000541171 ELMOD3Q96FG2 381 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 POM121L2Q96KW2 1035 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 INTS9Q9NV88 658 aaKnown RBP20.39■□□□□ 0.85
LEMD3-203ENST00000541171 RIMS3Q9UJD0 308 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 UGT2A1Q9Y4X1 527 aa20.39■□□□□ 0.85
LEMD3-203ENST00000541171 DYSFO75923 2080 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 LOC100509620A0A075B734 347 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 PLSCR5A0PG75 271 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 ISPDA4D126 451 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 MGRN1O60291 552 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 RBM34P42696 430 aaKnown RBP20.38■□□□□ 0.85
LEMD3-203ENST00000541171 GDI2P50395 445 aaKnown RBP20.38■□□□□ 0.85
LEMD3-203ENST00000541171 ZNF133P52736 654 aaPredicted RBP20.38■□□□□ 0.85
LEMD3-203ENST00000541171 ERVK-25P63136 954 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 TOP3AQ13472 1001 aaPredicted RBP20.38■□□□□ 0.85
LEMD3-203ENST00000541171 NANOGP8Q6NSW7 305 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 USP43Q70EL4 1123 aa20.38■□□□□ 0.85
LEMD3-203ENST00000541171 TSPEARQ8WU66 669 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms