RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 YAF2Q8IY57 180 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 BEST3Q8N1M1 668 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CLEC1AQ8NC01 280 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 RPS4Y2Q8TD47 263 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 NPAS1Q99742 590 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF471Q9BX82 626 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 LDAHQ9H6V9 325 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 MMP25Q9NPA2 562 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 IL23AQ9NPF7 189 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 GDE1Q9NZC3 331 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 EMC3Q9P0I2 261 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CPNE7Q9UBL6 633 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 HEBP2Q9Y5Z4 205 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 MRPS18BQ9Y676 258 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 A6NCN8 305 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 NPIPB9F8W1W9 429 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ARPC3O15145 178 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CA3P07451 260 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC35E2P0CK97 266 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ALOX5APP20292 161 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF10P21506 573 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 AKR1D1P51857 326 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CAPZA1P52907 286 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 MC2RQ01718 297 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 UBXN2BQ14CS0 331 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 STK11Q15831 433 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CORO6Q6QEF8 472 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM185AQ8NFB2 350 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 PXT1Q8NFP0 134 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR1J4Q8NGS1 313 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 ROBO4Q8WZ75 1007 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 CMKLR1Q99788 373 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 DPYSL5Q9BPU6 564 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMPRSS13Q9BYE2 586 aa9.36□□□□□ -0.91
CDC42SE1-207ENST00000540998 A0A1W2PQF6 199 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM82A0PJX8 343 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 BET1O15155 118 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 RAB3DO95716 219 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 PBX2P40425 430 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ILF3Q12906 894 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF169Q14929 603 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 C3orf33Q6P1S2 294 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF550Q7Z398 422 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 HDDC2Q7Z4H3 204 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 LRRC75AQ8NAA5 344 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 BHLHE23Q8NDY6 225 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR148Q8TDV2 347 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC22A18Q96BI1 424 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 C4orf45Q96LM5 186 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 WDR92Q96MX6 357 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 GAL3ST4Q96RP7 486 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ADOQ96SZ5 270 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC6A7Q99884 636 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 Q9N2J8 555 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 NOP16Q9Y3C1 178 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 UNC13CQ8NB66 2214 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 KRBOX1C9JBD0 128 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 H0YIG0 161 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 EIF1AYO14602 144 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 LINC01565O15544 149 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 TNFSF14O43557 240 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SULT1B1O43704 296 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF254O75437 659 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 KLF8O95600 359 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 NUDT14O95848 222 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 HOXB2P14652 356 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 HPGDP15428 266 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 TACR3P29371 465 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SDHAP31040 664 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 DHRS2Q13268 280 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SERTAD2Q14140 314 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 NFATC4Q14934 902 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ATPAF1Q5TC12 328 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 WDFY1Q8IWB7 410 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 JAGN1Q8N5M9 183 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF563Q8TA94 476 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SEH1LQ96EE3 360 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 VRK1Q99986 396 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 UTP23Q9BRU9 249 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 MFRPQ9BY79 579 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 COMMD4Q9H0A8 199 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR10A5Q9H207 317 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 KLK13Q9UKR3 277 aa9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 PHF3Q92576 2039 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-207ENST00000540998 TRBV5-7A0A0A0MS05 114 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC25A12O75746 678 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 GNRH1P01148 92 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 TACSTD2P09758 323 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 RAB11BQ15907 218 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms