RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ROBO4Q8WZ75 1007 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 PPP1R14AQ96A00 147 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF845Q96IR2 970 aaPredicted RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 MED18Q9BUE0 208 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC6A15Q9H2J7 730 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 MIXL1Q9H2W2 232 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 FRRS1LQ9P0K9 344 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 A3GALT2U3KPV4 340 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 LOC102725191A0A1B0GVB3 256 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR5H15A6NDH6 313 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 PIN1P1O15428 100 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 EFSO43281 561 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CXCL13O43927 109 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 NME2P1O60361 137 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ZFPL1O95159 310 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 PNPP00491 289 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SP1P08047 785 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF43P17038 809 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 NME2P22392 152 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 FKBP2P26885 142 aaKnown RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CALRP27797 417 aaKnown RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CRABP1P29762 137 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CDAP32320 146 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 KIR3DL2P43630 455 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 MEOX1P50221 254 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 RORCP51449 518 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 AGFG1P52594 562 aaKnown RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR10A3P58181 314 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 FOXC1Q12948 553 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 RTP5Q14D33 572 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ACSM3Q53FZ2 586 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 CREB3L2Q70SY1 520 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 PRSS35Q8N3Z0 413 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR9K2Q8NGE7 335 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR10AC1Q8NH08 325 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR6X1Q8NH79 312 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 BORCS5Q969J3 196 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC25A44Q96H78 314 aaPredicted RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 OR8B4Q96RC9 309 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ABHD6Q9BV23 337 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 MFRPQ9BY79 579 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 ABI3Q9P2A4 366 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 GSTK1Q9Y2Q3 226 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 LIPGQ9Y5X9 500 aa10.91□□□□□ -0.66
AP003559.1-201ENST00000540906 PHF3Q92576 2039 aaKnown RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 A0A075B6Q4 140 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 TRABD2BA6NFA1 517 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 H3BSH0 61 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 CASKO14936 926 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 KHDRBS3O75525 346 aaKnown RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 GLSO94925 669 aaPredicted RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 CD53P19397 219 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 SOX6P35712 828 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 CCL11P51671 97 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 SOX8P57073 446 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 CLRN1P58418 232 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 GLO1Q04760 184 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 MFGE8Q08431 387 aaPredicted RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 EIF2B1Q14232 305 aaKnown RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 ZNF846Q147U1 533 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 RNFT1Q5M7Z0 435 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 AGAP7PQ5VUJ5 663 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 HBMQ6B0K9 141 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 SLC25A25Q6KCM7 469 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 LAX1Q8IWV1 398 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 RDH10Q8IZV5 341 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 FDCSPQ8NFU4 85 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 OR10D3Q8NH80 312 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 ST7LQ8TDW4 575 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 MCHR2Q969V1 340 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 AGAP4Q96P64 663 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 OR14A2Q96R54 314 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 ELOVL3Q9HB03 270 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 EMC7Q9NPA0 242 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 POLHQ9Y253 713 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 MRPS18CQ9Y3D5 142 aaKnown RBP10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 UGT2A1Q9Y4X1 527 aa10.9□□□□□ -0.66
AP003559.1-201ENST00000540906 A0A0G2JK05 382 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 DOK2O60496 412 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 IGHG1P01857 330 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 KRT8P05787 483 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 HPNP05981 417 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 POU3F2P20265 443 aaPredicted RBP10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 GALP22466 123 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 SELENOPP49908 381 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 PMP22Q01453 160 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 EGR3Q06889 387 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 ALKBH1Q13686 389 aaKnown RBP10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 PCK2Q16822 640 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 ODF4Q2M2E3 257 aa10.89□□□□□ -0.67
AP003559.1-201ENST00000540906 ZMAT1Q5H9K5 638 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms