RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 CPEB3Q8NE35 698 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 OR1J1Q8NGS3 322 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 MOSPD2Q8NHP6 518 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 GTF3AQ92664 365 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 FAHD2AQ96GK7 314 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 KCNN2Q9H2S1 579 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF665Q9H7R5 613 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 SIAEQ9HAT2 523 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 C20orf141Q9NUB4 165 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 STX18Q9P2W9 335 aaKnown RBP12.05□□□□□ -0.48
SNHG1-213ENST00000540725 BAG5Q9UL15 447 aa12.05□□□□□ -0.48
SNHG1-213ENST00000540725 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 DYNC1I1O14576 645 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 TPD52L2O43399 206 aaKnown RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 PNPP00491 289 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 IGF2P01344 180 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 MT-ND5P03915 603 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 DRD4P21917 467 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 CCNOP22674 350 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 CDAP32320 146 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 TEKQ02763 1124 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 FMODQ06828 376 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 CYLC2Q14093 348 aaPredicted RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 MOGQ16653 247 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 ARMC4Q5T2S8 1044 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 ACSM5Q6NUN0 579 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 C12orf54Q6X4T0 127 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 USP51Q70EK9 711 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 CALHM3Q86XJ0 350 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 ZFAND2BQ8WV99 257 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 TMEM239Q8WW34 195 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 LIPHQ8WWY8 451 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 NABP1Q96AH0 204 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 NMD3Q96D46 503 aaKnown RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 SIKE1Q9BRV8 207 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
SNHG1-213ENST00000540725 SMURF2Q9HAU4 748 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 CCNB1IP1Q9NPC3 277 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 RIMS3Q9UJD0 308 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 UGT2A1Q9Y4X1 527 aa12.04□□□□□ -0.48
SNHG1-213ENST00000540725 IGKV1D-43A0A0B4J1Z2 117 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 NPIPB13A6NJU9 1138 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 NPIPB4C9JG80 1138 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 FXYD1O00168 92 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 RGS9O75916 674 aaPredicted RBP12.03□□□□□ -0.48
SNHG1-213ENST00000540725 TSPAN19P0C672 248 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 ANPEPP15144 967 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF32P17041 273 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 STOMP27105 288 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 CD47Q08722 323 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 PIN1Q13526 163 aaPredicted RBP12.03□□□□□ -0.48
SNHG1-213ENST00000540725 TSTQ16762 297 aaKnown RBP12.03□□□□□ -0.48
SNHG1-213ENST00000540725 METTL21CQ5VZV1 264 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
SNHG1-213ENST00000540725 ZNF101Q8IZC7 436 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 OR8J3Q8NGG0 315 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 HDAC2Q92769 488 aaKnown RBP12.03□□□□□ -0.48
SNHG1-213ENST00000540725 LRRC58Q96CX6 371 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 RAB39BQ96DA2 213 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 SH3GL1Q99961 368 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 ECSITQ9BQ95 431 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 MED31Q9Y3C7 131 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 WIPI2Q9Y4P8 454 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 CACNG2Q9Y698 323 aa12.03□□□□□ -0.48
SNHG1-213ENST00000540725 LOC105371242A0A075B767 164 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 PLPP2O43688 288 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 DEAF1O75398 565 aaPredicted RBP12.02□□□□□ -0.49
SNHG1-213ENST00000540725 MPZL1O95297 269 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 AVPP01185 164 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 NR2C1P13056 603 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 EPHA1P21709 976 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 GCH1P30793 250 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 WNT5AP41221 380 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 OR1E2P47887 323 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 ZNF81P51508 661 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 LAPTM4AQ15012 233 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 SGCAQ16586 387 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 HFEQ30201 348 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 ZNF718Q3SXZ3 478 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 ERICH5Q6P6B1 374 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 TEX29Q8N6K0 151 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 AKR7LQ8NHP1 331 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 IPCEF1Q8WWN9 437 aaPredicted RBP12.02□□□□□ -0.49
SNHG1-213ENST00000540725 NSMAFQ92636 917 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 ELMOD3Q96FG2 381 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 TXNIPQ9H3M7 391 aa12.02□□□□□ -0.49
SNHG1-213ENST00000540725 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 A0A0G2JMP0 313 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 A0A0X1KG70 313 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 C5orf49A4QMS7 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms