RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 FNDC8Q8TC99 324 aa18■□□□□ 0.47
CHFR-217ENST00000540537 ACOT11Q8WXI4 607 aaPredicted RBP18■□□□□ 0.47
CHFR-217ENST00000540537 NABP1Q96AH0 204 aa18■□□□□ 0.47
CHFR-217ENST00000540537 BEX2Q9BXY8 128 aa18■□□□□ 0.47
CHFR-217ENST00000540537 SHARPINQ9H0F6 387 aa18■□□□□ 0.47
CHFR-217ENST00000540537 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
CHFR-217ENST00000540537 ZNF346Q9UL40 294 aaKnown RBP18■□□□□ 0.47
CHFR-217ENST00000540537 FZR1Q9UM11 496 aa18■□□□□ 0.47
CHFR-217ENST00000540537 IGKV1D-43A0A0B4J1Z2 117 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 ATP8B1O43520 1251 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 PRSS23O95084 383 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 SERPINA1P01009 418 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 FAM157BP0CG42 384 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 CCL2P13500 99 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 IGFBP5P24593 272 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 CDAP32320 146 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 SLC9A3P48764 834 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 SEC24CP53992 1094 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 SELENOVP59797 346 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 CTXN1P60606 82 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 HSF2Q03933 536 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 FMODQ06828 376 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 THEM4Q5T1C6 240 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 ZNF730Q6ZMV8 503 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 FKBP9P1Q75LS8 142 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 HPS1Q92902 700 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 CMTM5Q96DZ9 223 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 KCTD14Q9BQ13 255 aaPredicted RBP17.99■□□□□ 0.47
CHFR-217ENST00000540537 BCL2L14Q9BZR8 327 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 MYLK2Q9H1R3 596 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 CCNB1IP1Q9NPC3 277 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 DUSP13Q9UII6 198 aa17.99■□□□□ 0.47
CHFR-217ENST00000540537 TRAV27A0A087WT01 109 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 A0A087WUU8 490 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 A0A1W2PPW3 197 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 EFCAB9A8MZ26 197 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 LILRA1O75019 489 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 ZNF250P15622 560 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 APLNRP35414 380 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 RAD52P43351 418 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 FHL1Q13642 323 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 MAD2L1BPQ15013 274 aaPredicted RBP17.98■□□□□ 0.47
CHFR-217ENST00000540537 PABPC1L2AQ5JQF8 200 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 ELFN2Q5R3F8 820 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 MBOAT2Q6ZWT7 520 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 OAFQ86UD1 273 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 FAM156AQ8NDB6 213 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 OR51A7Q8NH64 312 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 ZNF519Q8TB69 540 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 NSMAFQ92636 917 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 FAM162AQ96A26 154 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 RBP7Q96R05 134 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 ELAC2Q9BQ52 826 aaKnown RBP17.98■□□□□ 0.47
CHFR-217ENST00000540537 ANKRD19PQ9H560 264 aa17.98■□□□□ 0.47
CHFR-217ENST00000540537 IGLV3-9A0A075B6K5 115 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 LRP5LA4QPB2 252 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 A6NIZ1 184 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 LYNX1G3V0Z9 82 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 LYNX1P0DP58 116 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 ZNF32P17041 273 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 TCN1P20061 433 aaPredicted RBP17.97■□□□□ 0.47
CHFR-217ENST00000540537 PRDX6P30041 224 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 UCP2P55851 309 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 KLF3P57682 345 aaPredicted RBP17.97■□□□□ 0.47
CHFR-217ENST00000540537 RAP1BP61224 184 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 PSME3P61289 254 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 RAP1AP62834 184 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 SGCAQ16586 387 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 FAM27BQ5VT28 67 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 IGFN1Q86VF2 1251 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 CYP4Z1Q86W10 505 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 MEX3DQ86XN8 651 aaKnown RBP17.97■□□□□ 0.47
CHFR-217ENST00000540537 OR13C2Q8NGS9 318 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 SPATA3Q8NHX4 192 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 SYNPRQ8TBG9 265 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 RDH5Q92781 318 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 TSPAN32Q96QS1 320 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 CHODLQ9H9P2 273 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 GPR160Q9UJ42 338 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 RPS6KA6Q9UK32 745 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 ENPP4Q9Y6X5 453 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 SVEP1Q4LDE5 3571 aa17.97■□□□□ 0.47
CHFR-217ENST00000540537 CLPTM1O96005 669 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 TGFAP01135 160 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 HPXP02790 462 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 LCKP06239 509 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 APEX1P27695 318 aaKnown RBP17.96■□□□□ 0.47
CHFR-217ENST00000540537 MRPS11P82912 194 aaKnown RBP17.96■□□□□ 0.47
CHFR-217ENST00000540537 NKPD1Q17RQ9 610 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 FOXL2NBQ6ZUU3 175 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 TMPRSS11FQ6ZWK6 438 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 ARIH2OSQ8N7S6 290 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 CPEB3Q8NE35 698 aaKnown RBP17.96■□□□□ 0.47
CHFR-217ENST00000540537 C11orf40Q8WZ69 217 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 SOX7Q9BT81 388 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 OR51B6Q9H340 312 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 NMNAT1Q9HAN9 279 aaPredicted RBP17.96■□□□□ 0.47
CHFR-217ENST00000540537 SLCO1C1Q9NYB5 712 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 TAAR3PQ9P1P4 343 aa17.96■□□□□ 0.47
CHFR-217ENST00000540537 CDC42EP2O14613 210 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms