RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 GJA4P35212 333 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 DLSTP36957 453 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 PBX2P40425 430 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 HFEQ30201 348 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC22A6Q4U2R8 563 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 C11orf87Q6NUJ2 197 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 TMEM17Q86X19 198 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 FAM219AQ8IW50 185 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 PM20D2Q8IYS1 436 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 SDR16C5Q8N3Y7 309 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 OR1J4Q8NGS1 313 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 TRIM43Q96BQ3 446 aaPredicted RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 C12orf57Q99622 126 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 LPAR4Q99677 370 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC6A7Q99884 636 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 MLXQ9UH92 298 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 ARID1AO14497 2285 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 F5P12259 2224 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 WISP1O95388 367 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 PLGP00747 810 aaPredicted RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 CD14P08571 375 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 GRK6P43250 576 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 CENPAP49450 140 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 RPS21P63220 83 aaKnown RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 EGR4Q05215 589 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 CD226Q15762 336 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 RAB11BQ15907 218 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 DEFB115Q30KQ5 88 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 C3orf33Q6P1S2 294 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 LRRC75AQ8NAA5 344 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 C2CD4CQ8TF44 421 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 NKD1Q969G9 470 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 VSTM2LQ96N03 204 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 ASB16Q96NS5 453 aa12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 KLF2Q9Y5W3 355 aaPredicted RBP12.59□□□□□ -0.39
SCNN1A-215ENST00000540037 FANCMQ8IYD8 2048 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 DCDC2BA2VCK2 349 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM235A6NFC5 223 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 H7C2Y5 167 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CD34P28906 385 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 PRPS1P60891 318 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 RIPPLY1Q0D2K3 151 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNHIT3Q15649 155 aaPredicted RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF74Q16587 644 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ASB12Q8WXK4 309 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 MSRAQ9UJ68 235 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 VSIG4Q9Y279 399 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 MRPS18BQ9Y676 258 aaKnown RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A0D9SG52 128 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 LOC100289279A0A1B0GTE1 492 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 BCL2L11O43521 198 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ACTL6AO96019 429 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF735P0CB33 412 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CT45A8P0DMV1 189 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CT45A9P0DMV2 189 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF10P21506 573 aaPredicted RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SDHAP31040 664 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 BTG2P78543 158 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 RPL18Q07020 188 aaKnown RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 MEP1BQ16820 701 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CT45A2Q5DJT8 189 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM31Q5JXX7 168 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 CORO6Q6QEF8 472 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC43A2Q8N370 569 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 GRHPRQ9UBQ7 328 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 GPN3Q9UHW5 284 aaPredicted RBP12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 HEBP2Q9Y5Z4 205 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 SPACA6W5XKT8 324 aa12.58□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A1B0GTI1 187 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM212A6NML5 194 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 F5H0A9 414 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 NPIPB9F8W1W9 429 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 FADS1O60427 444 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CDC40O60508 579 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CD8AP01732 235 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 HLA-DQA2P01906 255 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 NOGQ13253 232 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF141Q15928 474 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TANGO2Q6ICL3 276 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 RTN4RL2Q86UN3 420 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 ZFP82Q8N141 532 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 FRMD1Q8N878 549 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms