RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
USB1-203ENST00000539737 TRBV4-1A0A0J9YWV2 114 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 NPIPB13A6NJU9 1138 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 NPIPB4C9JG80 1138 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 MCIDASD6RGH6 385 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 RPL36A-HNRNPH2H7BZ11 118 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 WNT9BO14905 357 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 UPK3AO75631 287 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 KRT36O76013 467 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 RAP2AP10114 183 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 DAOP14920 347 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 EGR1P18146 543 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 MAKP20794 623 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 RRM2P31350 389 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 AQP2P41181 271 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 GPR4P46093 362 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 BIDP55957 195 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 HGFACQ04756 655 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 TAF11Q15544 211 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 ALG10Q5BKT4 473 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 CARD17Q5XLA6 110 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 TBPL2Q6SJ96 375 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 NHLRC1Q6VVB1 395 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 TMPRSS11FQ6ZWK6 438 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 OAFQ86UD1 273 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 CCDC36Q8IYA8 594 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 C20orf196Q8IYI0 205 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 OR4K5Q8NGD3 323 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 OR6N1Q8NGY5 312 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 OR52J3Q8NH60 311 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
USB1-203ENST00000539737 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 KATNB1Q9BVA0 655 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 CADM1Q9BY67 442 aaKnown RBP12.89□□□□□ -0.35
USB1-203ENST00000539737 LRMDAQ9H2I8 198 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
USB1-203ENST00000539737 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
USB1-203ENST00000539737 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
USB1-203ENST00000539737 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 ARPC4-TTLL3A0A0A6YYG9 625 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 DHRS12A0PJE2 317 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 CENPBD1B2RD01 187 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 NDUFS8O00217 210 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 GSC2O15499 205 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 SEC14L2O76054 403 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 BCL10O95999 233 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 IGHG1P01857 330 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
USB1-203ENST00000539737 THBS4P35443 961 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 IFNGR2P38484 337 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 CAPZA2P47755 286 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 CSNK1A1P48729 337 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 CAMK2DQ13557 499 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 C3orf36Q3SXR2 165 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 FAM205BPQ63HN1 556 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 RFLNBQ8N5W9 214 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 SEMA6DQ8NFY4 1073 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 OR4F15Q8NGB8 312 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 BCL2L2Q92843 193 aaPredicted RBP12.88□□□□□ -0.35
USB1-203ENST00000539737 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
USB1-203ENST00000539737 FAM46AQ96IP4 442 aaKnown RBP12.88□□□□□ -0.35
USB1-203ENST00000539737 FUZQ9BT04 418 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 EMC6Q9BV81 110 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 GPR35Q9HC97 309 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 AURKCQ9UQB9 309 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 TGP01266 2768 aa12.88□□□□□ -0.35
USB1-203ENST00000539737 TRAV27A0A087WT01 109 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 M0R3G1 203 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 IGHMP01871 453 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 F13BP05160 661 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 NR2C1P13056 603 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 OMPP47874 163 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 LIMS1P48059 325 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 ARF1P84077 181 aaKnown RBP12.87□□□□□ -0.35
USB1-203ENST00000539737 NAAAQ02083 359 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 MELKQ14680 651 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 SEC23BQ15437 767 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 SPATA24Q86W54 205 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 LINC00471Q8N535 108 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 NOXO1Q8NFA2 376 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 OR51A7Q8NH64 312 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 ASB10Q8WXI3 467 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 SLC7A8Q9UHI5 535 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 POMPQ9Y244 141 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 LYVE1Q9Y5Y7 322 aa12.87□□□□□ -0.35
USB1-203ENST00000539737 ZNF99A8MXY4 864 aaPredicted RBP12.86□□□□□ -0.35
USB1-203ENST00000539737 FAM157AC9JC47 383 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 CDC42EP2O14613 210 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms