RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MCCC1Q96RQ3 725 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CNN2Q99439 309 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SULT4A1Q9BR01 284 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 EMC6Q9BV81 110 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ZYG11BQ9C0D3 744 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 XKR8Q9H6D3 395 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 HEXA-AS1Q9H8Q6 139 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CYP3A43Q9HB55 503 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PTTG3PQ9NZH4 202 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 XCL2Q9UBD3 114 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 Q9UF83 564 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 VSIG4Q9Y279 399 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RPL36Q9Y3U8 105 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RALGAPBQ86X10 1494 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 KMT2EQ8IZD2 1858 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NUP214P35658 2090 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CDC42BPBQ9Y5S2 1711 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PKHD1L1Q86WI1 4243 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TP53BP1Q12888 1972 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PRRC2AP48634 2157 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PDS5BQ9NTI5 1447 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 WNK3Q9BYP7 1800 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PRSS37A4D1T9 235 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ERICH4A6NGS2 130 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CYSRT1A8MQ03 144 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MKRN2OSH3BPM6 223 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GPR171O14626 319 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 EMC8O43402 210 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 XRCC2O43543 280 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CDC40O60508 579 aaKnown RBP eCLIP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RAMP3O60896 148 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 STX11O75558 287 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 WISP3O95389 354 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 STAMBPO95630 424 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CTSLP07711 333 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SERPINA6P08185 405 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 P0C879 139 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PNMTP11086 282 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DPEP1P16444 411 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NTSP30990 170 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 HOXA9P31269 272 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 UGT2B10P36537 528 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC26A3P40879 764 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 QARSP47897 775 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 IST1P53990 364 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 NUP107P57740 925 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CXCL6P80162 114 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SRYQ05066 204 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ORC2Q13416 577 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 STK38Q15208 465 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ECSCRQ19T08 205 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RGS21Q2M5E4 152 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 C18orf21Q32NC0 220 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PAN3Q58A45 887 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DMRTC1Q5HYR2 192 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM31Q5JXX7 168 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC25A30Q5SVS4 291 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LCE3EQ5T5B0 92 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FHL5Q5TD97 284 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLX4IPQ5VYV7 408 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FRMPD2BQ6IN97 320 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 ENPP6Q6UWR7 440 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 UNQ9370/PRO34162Q6UXP9 181 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FAM122BQ7Z309 247 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TSEN54Q7Z6J9 526 aaKnown RBP0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LHFPL3Q86UP9 236 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RIMKLAQ8IXN7 391 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 CEND1Q8N111 149 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GPD1LQ8N335 351 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 C17orf78Q8N4C9 275 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RAB42Q8N4Z0 105 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DTD1Q8TEA8 209 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM246Q9BRR3 403 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 TRIM62Q9BVG3 475 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LRRN3Q9H3W5 708 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 FBXO44Q9H4M3 255 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 POPDC2Q9HBU9 364 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LYRM4Q9HD34 91 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 GIN1Q9NXP7 522 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 SLC7A8Q9UHI5 535 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 RNF24Q9Y225 148 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC42Q9Y546 428 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 PLA2R1Q13018 1463 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 MROH2AA6NES4 1674 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 KIDINS220Q9ULH0 1771 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 HECW1Q76N89 1606 aa0.76□□□□□ -2.29
HIF1A-204ENST00000539097 DISP2A7MBM2 1401 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1B0GUH1 482 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC5A10A0PJK1 596 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LYRM9A8MSI8 78 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF879B4DU55 563 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C9JVG2 144 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C15orf65H3BRN8 121 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ITGB1BP1O14713 200 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TIMM8AO60220 97 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NIPSNAP2O75323 286 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC2A10O95528 541 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C1orf105O95561 183 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RAB3DO95716 219 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms