RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 INIPQ9NRY2 104 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 BAG5Q9UL15 447 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 UGT2A1Q9Y4X1 527 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 TRAV20A0A0B4J274 112 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 A0A0G2JND7 137 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 NPIPB13A6NJU9 1138 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 HMGB1P1B2RPK0 211 aaPredicted RBP10.66□□□□□ -0.7
VAMP1-206ENST00000538970 NPIPB4C9JG80 1138 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 MGRN1O60291 552 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 PNPP00491 289 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 APLNRP35414 380 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 MVKQ03426 396 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 HSF2Q03933 536 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 GLO1Q04760 184 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 FMODQ06828 376 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 PIN1Q13526 163 aaPredicted RBP10.66□□□□□ -0.7
VAMP1-206ENST00000538970 CYLC2Q14093 348 aaPredicted RBP10.66□□□□□ -0.7
VAMP1-206ENST00000538970 PABPC1L2AQ5JQF8 200 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 AVPI1Q5T686 147 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 METTL21CQ5VZV1 264 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 SHQ1Q6PI26 577 aaKnown RBP10.66□□□□□ -0.7
VAMP1-206ENST00000538970 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 OR1J1Q8NGS3 322 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 MOSPD2Q8NHP6 518 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 ZFAND2BQ8WV99 257 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM239Q8WW34 195 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 LIPHQ8WWY8 451 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 SIAEQ9HAT2 523 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 G6PC2Q9NQR9 355 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 STX18Q9P2W9 335 aaKnown RBP10.66□□□□□ -0.7
VAMP1-206ENST00000538970 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 TENM1Q9UKZ4 2725 aa10.66□□□□□ -0.7
VAMP1-206ENST00000538970 TGP01266 2768 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 IGHV1-69-2A0A0G2JMI3 117 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 SHOX2O60902 331 aaPredicted RBP10.65□□□□□ -0.7
VAMP1-206ENST00000538970 DEAF1O75398 565 aaPredicted RBP10.65□□□□□ -0.7
VAMP1-206ENST00000538970 IGHV3-13P01766 116 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 MT-ND5P03915 603 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 THRBP10828 461 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF32P17041 273 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 STOMP27105 288 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 CDAP32320 146 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 WNT5AP41221 380 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 TEKQ02763 1124 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 MOGQ16653 247 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 COQ5Q5HYK3 327 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM255AQ5JRV8 349 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 FAHD2BQ6P2I3 314 aaPredicted RBP10.65□□□□□ -0.7
VAMP1-206ENST00000538970 THSD4Q6ZMP0 1018 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
VAMP1-206ENST00000538970 USP51Q70EK9 711 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF101Q8IZC7 436 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
VAMP1-206ENST00000538970 FAHD2AQ96GK7 314 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 POM121L2Q96KW2 1035 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 SH3GL1Q99961 368 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 SAP30LQ9HAJ7 183 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 CCNB1IP1Q9NPC3 277 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 MED31Q9Y3C7 131 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 CACNG2Q9Y698 323 aa10.65□□□□□ -0.7
VAMP1-206ENST00000538970 LOC100509620A0A075B734 347 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 CLDN25C9JDP6 229 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 PIP5K1CO60331 668 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 NR2C1P13056 603 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ANPEPP15144 967 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 DRD4P21917 467 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 CCNOP22674 350 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 CFPP27918 469 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 MPV17P39210 176 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 OR1E2P47887 323 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ZNF81P51508 661 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 MMP15P51511 669 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 CD47Q08722 323 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 TSTQ16762 297 aaKnown RBP10.64□□□□□ -0.71
VAMP1-206ENST00000538970 FAM209AQ5JX71 171 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 SPATA46Q5T0L3 261 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ACSM5Q6NUN0 579 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ERICH5Q6P6B1 374 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 SLC25A47Q6Q0C1 308 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 C12orf54Q6X4T0 127 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 RFPL4BQ6ZWI9 263 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 IPCEF1Q8WWN9 437 aaPredicted RBP10.64□□□□□ -0.71
VAMP1-206ENST00000538970 NSMAFQ92636 917 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 RAB39BQ96DA2 213 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 MARS2Q96GW9 593 aaKnown RBP10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ZNF583Q96ND8 569 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 ECSITQ9BQ95 431 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 KCNN2Q9H2S1 579 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 TXNIPQ9H3M7 391 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 DECR2Q9NUI1 292 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 WIPI2Q9Y4P8 454 aa10.64□□□□□ -0.71
VAMP1-206ENST00000538970 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
VAMP1-206ENST00000538970 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
VAMP1-206ENST00000538970 GMNCA6NCL1 334 aa10.63□□□□□ -0.71
VAMP1-206ENST00000538970 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms