RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 FOXB1Q99853 325 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 Q9H521 79 aa20.66■□□□□ 0.9
TMEM260-202ENST00000538838 NKX2-6A6NCS4 301 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 B4GALT1P15291 398 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 NUDT6P53370 316 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 CDH11P55287 796 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 OCLNQ16625 522 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 SMN1Q16637 294 aaKnown RBP20.65■□□□□ 0.9
TMEM260-202ENST00000538838 SLC25A30Q5SVS4 291 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 LINC01590Q5TEZ4 76 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 GID4Q8IVV7 300 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 LILRB4Q8NHJ6 448 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 KISS1RQ969F8 398 aaPredicted RBP20.65■□□□□ 0.9
TMEM260-202ENST00000538838 SEC61A2Q9H9S3 476 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 TMEM38BQ9NVV0 291 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 CLN6Q9NWW5 311 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 TAS2R16Q9NYV7 291 aa20.65■□□□□ 0.9
TMEM260-202ENST00000538838 H2AFY2Q9P0M6 372 aaPredicted RBP20.65■□□□□ 0.9
TMEM260-202ENST00000538838 GLCEO94923 617 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 MPZL1O95297 269 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 GAAP10253 952 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 ASCL1P50553 236 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 GLO1Q04760 184 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 STK11Q15831 433 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 FOXL2NBQ6ZUU3 175 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 GLB1L2Q8IW92 636 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 FBLIM1Q8WUP2 373 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 ZMYND19Q96E35 227 aaPredicted RBP20.64■□□□□ 0.9
TMEM260-202ENST00000538838 GALNT8Q9NY28 637 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 PCDHGB5Q9Y5G0 923 aa20.64■□□□□ 0.9
TMEM260-202ENST00000538838 TVP23AA6NH52 213 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 RAD51DO75771 328 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 SCG5P05408 212 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 LAP3P28838 519 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 FMO3P31513 532 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 CDK5R2Q13319 367 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 MEDAGQ5VYS4 303 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 LAIR2Q6ISS4 152 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF813Q6ZN06 617 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 MEPCEQ7L2J0 689 aaKnown RBP20.64■□□□□ 0.89
TMEM260-202ENST00000538838 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.64■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF433Q8N7K0 673 aaPredicted RBP20.64■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF511Q8NB15 262 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 OR1K1Q8NGR3 316 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 NABP1Q96AH0 204 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 MOKQ9UQ07 419 aa20.64■□□□□ 0.89
TMEM260-202ENST00000538838 CACNA1CQ13936 2221 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 DENRO43583 198 aaKnown RBP20.63■□□□□ 0.89
TMEM260-202ENST00000538838 HLA-DQA2P01906 255 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 GSTT1P30711 240 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 SH3BGRP55822 239 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-202ENST00000538838 P2RY6Q15077 328 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 MEP1BQ16820 701 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 SLC35D3Q5M8T2 416 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 KLHL24Q6TFL4 600 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 STAC2Q6ZMT1 411 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF808Q8N4W9 903 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-202ENST00000538838 SLC26A10Q8NG04 563 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 TEAD3Q99594 435 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 NELFAQ9H3P2 528 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 POLE4Q9NR33 117 aa20.63■□□□□ 0.89
TMEM260-202ENST00000538838 A0A096LPE4 126 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 A0A1W2PPZ6 126 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 TFP02787 698 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 HTR1FP30939 366 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 MRPS34P82930 218 aaKnown RBP20.62■□□□□ 0.89
TMEM260-202ENST00000538838 FAM27E3Q08E93 113 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 SGCAQ16586 387 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 SFRP5Q5T4F7 317 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 KRT80Q6KB66 452 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 C11orf40Q8WZ69 217 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 RFKQ969G6 155 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 Q96MT0 163 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 EMC7Q9NPA0 242 aa20.62■□□□□ 0.89
TMEM260-202ENST00000538838 MRPL22Q9NWU5 206 aaKnown RBP20.62■□□□□ 0.89
TMEM260-202ENST00000538838 CIB4A0PJX0 185 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 SLC22A31A6NKX4 558 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 J3QKU1 62 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 CD79BP40259 229 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 HSF2Q03933 536 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 HIKESHIQ53FT3 197 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 LCN1P1Q5VSP4 162 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 XKRXQ6PP77 449 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 AMBNQ9NP70 447 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 ELOVL5Q9NYP7 299 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 LRRC42Q9Y546 428 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 COMMD3-BMI1R4GMX3 469 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 HCFC1P51610 2035 aa20.61■□□□□ 0.89
TMEM260-202ENST00000538838 AGAP20933 346 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 MSR1P21757 451 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 CCKARP32238 428 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 TEKQ02763 1124 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 TGFBR3Q03167 851 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF91Q05481 1191 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 GABRA6Q16445 453 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 ANKRD16Q6P6B7 361 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 UGT2A3Q6UWM9 527 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF627Q7L945 461 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 BHLHA15Q7RTS1 189 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 SLC22A24Q8N4F4 322 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms