RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 FAM156AQ8NDB6 213 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 NSMAFQ92636 917 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 GORASP2Q9H8Y8 452 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 CDH20Q9HBT6 801 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 NDUFAF4Q9P032 175 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 FBXO9Q9UK97 447 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 UGT2A1Q9Y4X1 527 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 ATRQ13535 2644 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 CDC42EP2O14613 210 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SYNGR3O43761 229 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF26P17031 533 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-202ENST00000538809 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
RAB40B-202ENST00000538809 GPR4P46093 362 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SLC9A3P48764 834 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 GZMKP49863 264 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 CTXN1P60606 82 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ERVS71-1P61550 626 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ALKBH6Q3KRA9 238 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SLC36A2Q495M3 483 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 TMPRSS11FQ6ZWK6 438 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 OR13C2Q8NGS9 318 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SLC7A13Q8TCU3 470 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 NABP1Q96AH0 204 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 LRRC37BQ96QE4 947 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 FUZQ9BT04 418 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 CHODLQ9H9P2 273 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
RAB40B-202ENST00000538809 REV1Q9UBZ9 1251 aa12.86□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF346Q9UL40 294 aaKnown RBP12.86□□□□□ -0.35
RAB40B-202ENST00000538809 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 A0A1W2PRQ8 180 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 EFCAB9A8MZ26 197 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 DCTN3O75935 186 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 MMP7P09237 267 aaPredicted RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF23P17027 643 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 RHCEP18577 417 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 IGFBP5P24593 272 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 LIMS1P48059 325 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 HSF2Q03933 536 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 DGCR6Q14129 220 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 TBC1D28Q2M2D7 210 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 RGS7BPQ6MZT1 257 aaPredicted RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 IL17RELQ6ZVW7 336 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 ARIH2OSQ8N7S6 290 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 UBASH3BQ8TF42 649 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 TSPAN32Q96QS1 320 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 SOX7Q9BT81 388 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 ALG12Q9BV10 488 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 DUSP13Q9UII6 198 aa12.85□□□□□ -0.35
RAB40B-202ENST00000538809 SAMD4AQ9UPU9 718 aaKnown RBP12.85□□□□□ -0.35
RAB40B-202ENST00000538809 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
RAB40B-202ENST00000538809 LOC100289279A0A1B0GTE1 492 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 H7C1C5 153 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 MGRN1O60291 552 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 LMX1BO60663 402 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CLPTM1O96005 669 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 H1F0P07305 194 aaKnown RBP12.84□□□□□ -0.35
RAB40B-202ENST00000538809 NAT2P11245 290 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF32P17041 273 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 GIFP27352 417 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 IL2RGP31785 369 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 EVX1P49640 407 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 LCN6P62502 163 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 MRPS34P82930 218 aaKnown RBP12.84□□□□□ -0.35
RAB40B-202ENST00000538809 PLP2Q04941 152 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 TRIP10Q15642 601 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 SGCAQ16586 387 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 PABPC1L2AQ5JQF8 200 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 SAMD4BQ5PRF9 694 aaKnown RBP12.84□□□□□ -0.35
RAB40B-202ENST00000538809 PODNL1Q6PEZ8 512 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 FOXL2NBQ6ZUU3 175 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 DPPA2Q7Z7J5 298 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 OAFQ86UD1 273 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CYP4Z1Q86W10 505 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF786Q8N393 782 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CCT8L2Q96SF2 557 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CDRT15Q96T59 188 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CCNB1IP1Q9NPC3 277 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 MAGEL2Q9UJ55 1249 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 CDC42EP3Q9UKI2 254 aa12.84□□□□□ -0.35
RAB40B-202ENST00000538809 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms