RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TMEM225Q6GV28 225 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 LRRN1Q6UXK5 716 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 RNF128Q8TEB7 428 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 OXGR1Q96P68 337 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 RBP7Q96R05 134 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 ABHD6Q9BV23 337 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 EMC6Q9BV81 110 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 CYSLTR2Q9NS75 346 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 KLHL9Q9P2J3 617 aa13.24□□□□□ -0.29
ATL3-203ENST00000538786 A0A087WV48 116 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ANKRD61A6NGH8 418 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 AQP7P3A6NL99 342 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 PDCD5O14737 125 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 HRGP04196 525 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 CCR9P51686 369 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 IL18Q14116 193 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 THEM4Q5T1C6 240 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 RAET1LQ5VY80 246 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 KRT77Q7Z794 578 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 SYT9Q86SS6 491 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 GPAT4Q86UL3 456 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 PRSS35Q8N3Z0 413 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 SAMD12Q8N8I0 201 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATL3-203ENST00000538786 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ANKRD10Q9NXR5 420 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 MALT1Q9UDY8 824 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 IGKV1D-43A0A0B4J1Z2 117 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 A0A1B0GTH9 108 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 OR2M5A3KFT3 312 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ZNF814B7Z6K7 855 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ZNF254O75437 659 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 AQP8O94778 261 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 SPNP16150 400 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 NPR2P20594 1047 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 TRIP6Q15654 476 aaKnown RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 GLB1L2Q8IW92 636 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 OR52N5Q8NH56 324 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 PSMF1Q92530 271 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 SLC25A44Q96H78 314 aaPredicted RBP13.23□□□□□ -0.29
ATL3-203ENST00000538786 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 EXTL2Q9UBQ6 330 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ZNF318Q5VUA4 2279 aa13.23□□□□□ -0.29
ATL3-203ENST00000538786 ARPC4-TTLL3A0A0A6YYG9 625 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 TMEM127O75204 238 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 IGHG1P01857 330 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 EIF4EP06730 217 aaKnown RBP13.22□□□□□ -0.29
ATL3-203ENST00000538786 PGA4P0DJD7 388 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 PGA3P0DJD8 388 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 ZNF43P17038 809 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 ATF1P18846 271 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 TALDO1P37837 337 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 KIR3DL2P43630 455 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 DNASE1L1P49184 302 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 CLRN1P58418 232 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 H3F3AP84243 136 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 ASAH1Q13510 395 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 P2RY14Q15391 338 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 CSRP2Q16527 193 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 JMJD6Q6NYC1 403 aaPredicted RBP13.22□□□□□ -0.29
ATL3-203ENST00000538786 PIP4P1Q86T03 277 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 BEST3Q8N1M1 668 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 Q8N402 240 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 NOXO1Q8NFA2 376 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 GPR148Q8TDV2 347 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
ATL3-203ENST00000538786 TEKT2Q9UIF3 430 aa13.22□□□□□ -0.29
ATL3-203ENST00000538786 AK6Q9Y3D8 172 aaKnown RBP13.22□□□□□ -0.29
ATL3-203ENST00000538786 TRABD2BA6NFA1 517 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 GPR171O14626 319 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 RAD1O60671 282 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 EIF1BO60739 113 aaKnown RBP13.21□□□□□ -0.29
ATL3-203ENST00000538786 TNFSF15O95150 251 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 PAHP00439 452 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 HLA-DQB1P01920 261 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 RAF1P04049 648 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 HNRNPCP07910 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATL3-203ENST00000538786 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
ATL3-203ENST00000538786 MAGEB1P43366 347 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 CYB561P49447 251 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 RIDAP52758 137 aaKnown RBP13.21□□□□□ -0.29
ATL3-203ENST00000538786 MADCAM1Q13477 382 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 ZNF544Q6NX49 715 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 CCBE1Q6UXH8 406 aaPredicted RBP13.21□□□□□ -0.29
ATL3-203ENST00000538786 CADM3Q8N126 398 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 THRSPQ92748 146 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 ORAI1Q96D31 301 aa13.21□□□□□ -0.29
ATL3-203ENST00000538786 THOC3Q96J01 351 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms