RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 SLC37A3Q8NCC5 494 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 OR9Q1Q8NGQ5 310 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 HSD17B8Q92506 261 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 FBXO17Q96EF6 278 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 NRBF2Q96F24 287 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 CENPNQ96H22 339 aaPredicted RBP11.39□□□□□ -0.59
CHFR-216ENST00000538235 RAB3IPQ96QF0 476 aaPredicted RBP11.39□□□□□ -0.59
CHFR-216ENST00000538235 CIB1Q99828 191 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 MED20Q9H944 212 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 CRNNQ9UBG3 495 aaPredicted RBP11.39□□□□□ -0.59
CHFR-216ENST00000538235 TEX15Q9BXT5 2789 aa11.39□□□□□ -0.59
CHFR-216ENST00000538235 A6NIZ1 184 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 E9PQ18 207 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 M0R1B8 84 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 EI24O14681 340 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 CECR9P0C854 216 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 OSMP13725 252 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 HOXB6P17509 224 aaKnown RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 ANOS1P23352 680 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 PYCR1P32322 319 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 PEX19P40855 299 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 RAP1BP61224 184 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 RAP1AP62834 184 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 MRPS34P82930 218 aaKnown RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 CDK5Q00535 292 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 PIGFQ07326 219 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 MSMPQ1L6U9 139 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 FAM205BPQ63HN1 556 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 OR7E24Q6IFN5 339 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 ABHD12BQ7Z5M8 362 aaPredicted RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 TMEM200AQ86VY9 491 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 PQLC1Q8N2U9 271 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 ATG16L2Q8NAA4 619 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 OR52E2Q8NGJ4 325 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 SLC29A1Q99808 456 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 RBM4Q9BWF3 364 aaKnown RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 NMNAT2Q9BZQ4 307 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 CLEC4MQ9H2X3 399 aaPredicted RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 RPRD1BQ9NQG5 326 aaKnown RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 POFUT2Q9Y2G5 429 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 COA3Q9Y2R0 106 aaPredicted RBP11.38□□□□□ -0.59
CHFR-216ENST00000538235 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
CHFR-216ENST00000538235 A0A1W2PPL8 197 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 FAM183AA6NL82 134 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 G3V2T6 193 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 SLC16A7O60669 478 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 TFP02787 698 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 GYPBP06028 91 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 FCGR1AP12314 374 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 ANXA8P13928 327 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 GSTM3P21266 225 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 CD40P25942 277 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 LAP3P28838 519 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 SSTR2P30874 369 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
CHFR-216ENST00000538235 RPS6KA3P51812 740 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 GINS1Q14691 196 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 LINC01590Q5TEZ4 76 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 ZFP1Q6P2D0 407 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 P2RY8Q86VZ1 359 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 BBS1Q8NFJ9 593 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 OR51L1Q8NGJ5 315 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 IGFBPL1Q8WX77 278 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 LURAP1Q96LR2 239 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 ZNF416Q9BWM5 594 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 SLC25A19Q9HC21 320 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 B3GAT2Q9NPZ5 323 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 POLE4Q9NR33 117 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
CHFR-216ENST00000538235 MRPL22Q9NWU5 206 aaKnown RBP11.37□□□□□ -0.59
CHFR-216ENST00000538235 ZNF226Q9NYT6 803 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 B9D1Q9UPM9 204 aa11.37□□□□□ -0.59
CHFR-216ENST00000538235 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 DLGAP1O14490 977 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 ABCD4O14678 606 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 ALPLP05186 524 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 ZNF32P17041 273 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 POU1F1P28069 291 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 GRK5P34947 590 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 RPS27P42677 84 aaKnown RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 GIPRP48546 466 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 ELF3P78545 371 aaPredicted RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 TGFBR3Q03167 851 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 COX10Q12887 443 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 RAB39AQ14964 217 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 THEM4Q5T1C6 240 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 RPL13AP3Q6NVV1 102 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 ZNF704Q6ZNC4 412 aaPredicted RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 HDDC2Q7Z4H3 204 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 BCDIN3DQ7Z5W3 292 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms