RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PLCXD3Q63HM9 321 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 RNASEKQ6P5S7 137 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OR52B4Q8NGK2 314 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ASB17Q8WXJ9 295 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 LHX4Q969G2 390 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF583Q96ND8 569 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM59Q9BXS4 323 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 UCK1Q9HA47 277 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 HRASLSQ9HDD0 168 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 MAFBQ9Y5Q3 323 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NPFFR2Q9Y5X5 522 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ZCWPW2A0A1B0GU75 182 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ARNTLO00327 626 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 PIRO00625 290 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ELAVL4P26378 380 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF280AP59817 542 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SYT14P1Q58G82 188 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 FAAP20Q6NZ36 180 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OPALINQ96PE5 141 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OR1F2PQ96R84 312 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SLC12A9Q9BXP2 914 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 PRTFDC1Q9NRG1 225 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 RALYQ9UKM9 306 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 TSC2P49815 1807 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SLC16A7O60669 478 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NFATC1O95644 943 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OR2T7P0C7T2 308 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 PRPH2P23942 346 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 DCTDP32321 178 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SOX18P35713 384 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 P2RX1P51575 399 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 FABP5Q01469 135 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 KCNC3Q14003 757 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 C5orf46Q6UWT4 87 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 CPEB2Q7Z5Q1 589 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 FBXL6Q8N531 539 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OR2T27Q8NH04 317 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 KLRG1Q96E93 195 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 CASD1Q96PB1 797 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SGPP1Q9BX95 441 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 FZD8Q9H461 694 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 CGGBP1Q9UFW8 167 aaPredicted RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 CCDC187A0A096LP49 1063 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 HTR2CP28335 458 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 OTX2P32243 289 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 GLYATL3Q5SZD4 288 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 GPR137CQ8N3F9 429 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 CD200R1Q8TD46 325 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ASB13Q8WXK3 278 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NIPSNAP1Q9BPW8 284 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 LMAN1LQ9HAT1 526 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 TLR9Q9NR96 1032 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 HHLA2Q9UM44 414 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 EDDM13A0A1B0GTR0 161 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ISL1P61371 349 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NHLH2Q02577 135 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 VGLL4Q14135 290 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 LKAAEAR1Q8TD35 194 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SLC38A5Q8WUX1 472 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SLIRPQ9GZT3 109 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 SLC35B3Q9H1N7 401 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 ANKRD19PQ9H560 264 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 MUTYHQ9UIF7 546 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NDRG4Q9ULP0 352 aaKnown RBP5.24□□□□□ -1.57
CSMD1-215ENST00000537824 EMC9Q9Y3B6 208 aa5.24□□□□□ -1.57
CSMD1-215ENST00000537824 NPIPA5A0A0B4J1W7 369 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 PYCARD-AS1I3L0S3 204 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CHEK1O14757 476 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CXCL14O95715 111 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 BLVRBP30043 206 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SLC19A1P41440 591 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SLC6A11P48066 632 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 COL5A1-AS1Q5SY13 56 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 OPN5Q6U736 354 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SEZ6L2Q6UXD5 910 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 VRK3Q8IV63 474 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 LSMEM2Q8N112 164 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 RNF175Q8N4F7 328 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CERS5Q8N5B7 392 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 BRCA1P38398 1863 aaKnown RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 RBBP6Q7Z6E9 1792 aaKnown RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 DENND4CQ5VZ89 1909 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 NUDT21O43809 227 aaKnown RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CLEC3AO75596 197 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SYNGR4O95473 234 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 NDUFS1P28331 727 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 ST3GAL2Q16842 350 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 OR7E24Q6IFN5 339 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 FAM57BQ71RH2 274 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SCAMP4Q969E2 229 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SLC22A18Q96BI1 424 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM106CQ9BVX2 250 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CDCA4Q9BXL8 241 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 CHST2Q9Y4C5 530 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 ELOA3CA0A087WX78 387 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-215ENST00000537824 SOCS5O75159 536 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 RBP2P50120 134 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 HSD17B7P56937 341 aa5.23□□□□□ -1.57
CSMD1-215ENST00000537824 PRSS36Q5K4E3 855 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms