RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 RIMS3Q9UJD0 308 aa8.28□□□□□ -1.08
CHD4-207ENST00000537634 MED31Q9Y3C7 131 aa8.28□□□□□ -1.08
CHD4-207ENST00000537634 TRAV20A0A0B4J274 112 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 IGHV1-69-2A0A0G2JMI3 117 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 GMNCA6NCL1 334 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 NPIPB13A6NJU9 1138 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 NPIPB4C9JG80 1138 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 FXYD1O00168 92 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 MRASO14807 208 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 SLC2A10O95528 541 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 IGF2P01344 180 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 MMP7P09237 267 aaPredicted RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 THRBP10828 461 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 ANPEPP15144 967 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 CCNOP22674 350 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 OR1E2P47887 323 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 MRPS34P82930 218 aaKnown RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 GLO1Q04760 184 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 TOP3AQ13472 1001 aaPredicted RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 PIN1Q13526 163 aaPredicted RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 LRRC23Q53EV4 343 aaPredicted RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 PABPC1L2AQ5JQF8 200 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 ARMC4Q5T2S8 1044 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 AVPI1Q5T686 147 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 UNQ6126/PRO20091Q6UXV3 157 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 CALHM3Q86XJ0 350 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 MEX3DQ86XN8 651 aaKnown RBP8.27□□□□□ -1.09
CHD4-207ENST00000537634 TEX29Q8N6K0 151 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 OR1J1Q8NGS3 322 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 MOSPD2Q8NHP6 518 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 LRRC58Q96CX6 371 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 RAB39BQ96DA2 213 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 TMEM120AQ9BXJ8 343 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 SAP30LQ9HAJ7 183 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 SIAEQ9HAT2 523 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 SMURF2Q9HAU4 748 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 C20orf141Q9NUB4 165 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
CHD4-207ENST00000537634 A0A0A6YYJ9 748 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 PLSCR5A0PG75 271 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 BBIP1A8MTZ0 92 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 CLDN25C9JDP6 229 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 PNPP00491 289 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 NPPAP01160 153 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 IGHV3-13P01766 116 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 TROVE2P10155 538 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD4-207ENST00000537634 ZNF32P17041 273 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 STOMP27105 288 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 GCH1P30793 250 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 CDAP32320 146 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 IFNA8P32881 189 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 CRYBB2P43320 205 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ZNF81P51508 661 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ZNF133P52736 654 aaPredicted RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 LMO4P61968 165 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 MVKQ03426 396 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 FMODQ06828 376 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 MAPRE2Q15555 327 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 SGCAQ16586 387 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 TSTQ16762 297 aaKnown RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 HFEQ30201 348 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ALG10Q5BKT4 473 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 COQ5Q5HYK3 327 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ACSM5Q6NUN0 579 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 FAHD2BQ6P2I3 314 aaPredicted RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 USP51Q70EK9 711 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 CPEB3Q8NE35 698 aaKnown RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 LIPHQ8WWY8 451 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 NSMAFQ92636 917 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 GTF3AQ92664 365 aaKnown RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 HDAC2Q92769 488 aaKnown RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 FAHD2AQ96GK7 314 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 TIMD4Q96H15 378 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 TPD52L3Q96J77 140 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 TXNIPQ9H3M7 391 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 VIPAS39Q9H9C1 493 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 ARGLU1Q9NWB6 273 aaPredicted RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 EIF3KQ9UBQ5 218 aaKnown RBP8.26□□□□□ -1.09
CHD4-207ENST00000537634 UGT2A1Q9Y4X1 527 aa8.26□□□□□ -1.09
CHD4-207ENST00000537634 C5orf49A4QMS7 147 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 FAM220BPB1ANY3 271 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 PIP5K1CO60331 668 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 VENTXO95231 258 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 MPZL1O95297 269 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 TSPAN19P0C672 248 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 IFI30P13284 250 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 GUCA1AP43080 201 aaPredicted RBP8.25□□□□□ -1.09
CHD4-207ENST00000537634 GDI2P50395 445 aaKnown RBP8.25□□□□□ -1.09
CHD4-207ENST00000537634 RPL27P61353 136 aaKnown RBP8.25□□□□□ -1.09
CHD4-207ENST00000537634 ERVK-25P63136 954 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 ST3GAL3Q11203 375 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 KLF10Q13118 480 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 TAF11Q15544 211 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 ZNF718Q3SXZ3 478 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 CYBRD1Q53TN4 286 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 FAM209AQ5JX71 171 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 SPATA46Q5T0L3 261 aa8.25□□□□□ -1.09
CHD4-207ENST00000537634 FAM205BPQ63HN1 556 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms