RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 KCNK17Q96T54 332 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 CMKLR1Q99788 373 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 GTPBP2Q9BX10 602 aaKnown RBP14.05□□□□□ -0.16
MKS1-204ENST00000537529 TRABD2BA6NFA1 517 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 KHDRBS3O75525 346 aaKnown RBP14.05□□□□□ -0.16
MKS1-204ENST00000537529 DKK1O94907 266 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 BTCP35070 178 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 PTGS2P35354 604 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 SRP9P49458 86 aaKnown RBP14.05□□□□□ -0.16
MKS1-204ENST00000537529 MC2RQ01718 297 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 EXT1Q16394 746 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 ODF4Q2M2E3 257 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 C3orf33Q6P1S2 294 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 LINGO2Q7L985 606 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 TMPRSS12Q86WS5 348 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 SIAH3Q8IW03 269 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 IZUMO1Q8IYV9 350 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 SLC26A10Q8NG04 563 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 OR4K17Q8NGC6 315 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 POC1BQ8TC44 478 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 ULBP3Q9BZM4 244 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 FANCFQ9NPI8 374 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 AKAP7Q9P0M2 348 aaPredicted RBP14.05□□□□□ -0.16
MKS1-204ENST00000537529 OR5V1Q9UGF6 321 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 GTF2A1LQ9UNN4 478 aa14.05□□□□□ -0.16
MKS1-204ENST00000537529 PTRH2Q9Y3E5 179 aaKnown RBP14.05□□□□□ -0.16
MKS1-204ENST00000537529 ADAMTS9Q9P2N4 1935 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 TRAV8-7A0A075B6U6 113 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 GDF9O60383 454 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 ARSBP15848 533 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 CLDN12P56749 244 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 SCAND1P57086 179 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 MYBPHQ13203 477 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 OR7E24Q6IFN5 339 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 SLC23A3Q6PIS1 610 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 DND1Q8IYX4 353 aaKnown RBP14.04□□□□□ -0.16
MKS1-204ENST00000537529 ADPRHL1Q8NDY3 354 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 SYNPRQ8TBG9 265 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 MCHR2Q969V1 340 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 S100A16Q96FQ6 103 aaKnown RBP14.04□□□□□ -0.16
MKS1-204ENST00000537529 ZNF700Q9H0M5 742 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 RANGRFQ9HD47 186 aaPredicted RBP14.04□□□□□ -0.16
MKS1-204ENST00000537529 COPZ2Q9P299 210 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 ITGB1BP2Q9UKP3 347 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 NUBP2Q9Y5Y2 271 aa14.04□□□□□ -0.16
MKS1-204ENST00000537529 IGHV1-45A0A0A0MS14 117 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 SULT1B1O43704 296 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 MAS1P04201 325 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 ADRB1P08588 477 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 ART1P52961 327 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 FMODQ06828 376 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 DYRK1AQ13627 763 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 OR51A4Q8NGJ6 313 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 CAPSLQ8WWF8 208 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 MIB2Q96AX9 1013 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 PTGES2Q9H7Z7 377 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 PLEKHA1Q9HB21 404 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 RPH3AQ9Y2J0 694 aaPredicted RBP14.03□□□□□ -0.16
MKS1-204ENST00000537529 LRP12Q9Y561 859 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.03□□□□□ -0.16
MKS1-204ENST00000537529 EFNA2O43921 213 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 MPZL1O95297 269 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 DHFRP00374 187 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 UMODP07911 640 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 CCL4P13236 92 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 RRAS2P62070 204 aaPredicted RBP14.03□□□□□ -0.16
MKS1-204ENST00000537529 MRPS15P82914 257 aaKnown RBP14.03□□□□□ -0.16
MKS1-204ENST00000537529 CD83Q01151 205 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 MFGE8Q08431 387 aaPredicted RBP14.03□□□□□ -0.16
MKS1-204ENST00000537529 SNTA1Q13424 505 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 SLC22A10Q63ZE4 541 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 TIGD3Q6B0B8 471 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 CATSPERDQ86XM0 798 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 TCTE3Q8IZS6 198 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 FADS6Q8N9I5 356 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 C15orf40Q8WUR7 153 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 AKAP1Q92667 903 aaKnown RBP eCLIP14.03□□□□□ -0.16
MKS1-204ENST00000537529 MED29Q9NX70 200 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 FOXJ3Q9UPW0 622 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 SLC22A13Q9Y226 551 aa14.03□□□□□ -0.16
MKS1-204ENST00000537529 PI4KAP42356 2102 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 AQP8O94778 261 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 PNPP00491 289 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 COX6A1P12074 109 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 GDNFP39905 211 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 EIF1P41567 113 aaKnown RBP14.02□□□□□ -0.16
MKS1-204ENST00000537529 BIDP55957 195 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 MRPS10P82664 201 aaKnown RBP14.02□□□□□ -0.16
MKS1-204ENST00000537529 KLF9Q13886 244 aaPredicted RBP14.02□□□□□ -0.16
MKS1-204ENST00000537529 PCK2Q16822 640 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 TMEM69Q5SWH9 247 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 OPN5Q6U736 354 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 PRSS45Q7RTY3 260 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 DNAAF1Q8NEP3 725 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 SLC25A43Q8WUT9 341 aaPredicted RBP14.02□□□□□ -0.16
MKS1-204ENST00000537529 HAVCR1Q96D42 359 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 AUNIPQ9H7T9 357 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 KLHL9Q9P2J3 617 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 STEAP1Q9UHE8 339 aa14.02□□□□□ -0.16
MKS1-204ENST00000537529 FBXL2Q9UKC9 423 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms