RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 DNAJC27Q9NZQ0 273 aa21.3■■□□□ 1
HMGA2-208ENST00000537429 H2AFY2Q9P0M6 372 aaPredicted RBP21.3■■□□□ 1
HMGA2-208ENST00000537429 UBR5O95071 2799 aaPredicted RBP21.3■■□□□ 1
HMGA2-208ENST00000537429 NKX2-6A6NCS4 301 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 WBP4O75554 376 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 CDAP32320 146 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 SH3BGRP55822 239 aaPredicted RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 ARF1P84077 181 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 GLO1Q04760 184 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 APOFQ13790 326 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 SLC35D3Q5M8T2 416 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 SFRP5Q5T4F7 317 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 CXorf67Q86X51 503 aaPredicted RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 GID4Q8IVV7 300 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 TEAD3Q99594 435 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 TMEM38BQ9NVV0 291 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 DENRO43583 198 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 ENTPD6O75354 484 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 LYZL6O75951 148 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 GLCEO94923 617 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 GPANK1O95872 356 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 PSMB1P20618 241 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 LAP3P28838 519 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 MRPS34P82930 218 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 TGFBR3Q03167 851 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 STAC2Q6ZMT1 411 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 MEPCEQ7L2J0 689 aaKnown RBP21.29■■□□□ 1
HMGA2-208ENST00000537429 BOD1Q96IK1 185 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 FOXN4Q96NZ1 517 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 SEC61A2Q9H9S3 476 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 GALNT8Q9NY28 637 aa21.29■■□□□ 1
HMGA2-208ENST00000537429 A0A1W2PPL8 197 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CCDC182A6NF36 153 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 WIPF3A6NGB9 483 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 SEC14L2O76054 403 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CLDN14O95500 239 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 GAAP10253 952 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CD79BP40259 229 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 HSF2Q03933 536 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 SRSF1Q07955 248 aaKnown RBP eCLIP21.28■■□□□ 14e-8■■□□□ 13.1
HMGA2-208ENST00000537429 FAM27E3Q08E93 113 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CDK5R2Q13319 367 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 NRN1LQ496H8 165 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 SLC26A10Q8NG04 563 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 OR1K1Q8NGR3 316 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CNIH3Q8TBE1 160 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 NABP1Q96AH0 204 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 LRRC46Q96FV0 321 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 Q96MT0 163 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 Q9H521 79 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 CLN6Q9NWW5 311 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 LRRC42Q9Y546 428 aa21.28■■□□□ 1
HMGA2-208ENST00000537429 MPZL1O95297 269 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 SCG5P05408 212 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 NPR2P20594 1047 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 CENPAP49450 140 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 BLVRAP53004 296 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 CDH11P55287 796 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 TEKQ02763 1124 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 TSC22D1Q15714 1073 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 GABRA6Q16445 453 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 ANKRD16Q6P6B7 361 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 C1orf162Q8NEQ5 155 aaPredicted RBP21.27■■□□□ 1
HMGA2-208ENST00000537429 OR6K6Q8NGW6 343 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 HTRA1Q92743 480 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 KISS1RQ969F8 398 aaPredicted RBP21.27■■□□□ 1
HMGA2-208ENST00000537429 RFKQ969G6 155 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 CNBD2Q96M20 576 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 HDHD5Q9BXW7 423 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 NELFAQ9H3P2 528 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 POLE4Q9NR33 117 aa21.27■■□□□ 1
HMGA2-208ENST00000537429 CIB4A0PJX0 185 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 SLC22A31A6NKX4 558 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 TFP02787 698 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 B4GALT1P15291 398 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 HTR1FP30939 366 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 FMO3P31513 532 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 GUCA1AP43080 201 aaPredicted RBP21.26■□□□□ 0.99
HMGA2-208ENST00000537429 RPS7P62081 194 aaKnown RBP21.26■□□□□ 0.99
HMGA2-208ENST00000537429 LYPD4Q6UWN0 246 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 B3GLCTQ6Y288 498 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 ZNF813Q6ZN06 617 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 SLC22A24Q8N4F4 322 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 ZNF511Q8NB15 262 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 BCL2L2Q92843 193 aaPredicted RBP21.26■□□□□ 0.99
HMGA2-208ENST00000537429 SIAEQ9HAT2 523 aa21.26■□□□□ 0.99
HMGA2-208ENST00000537429 RAD51DO75771 328 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 GSTT1P30711 240 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 KCNMB1Q16558 191 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 SGCAQ16586 387 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 SMN1Q16637 294 aaKnown RBP21.25■□□□□ 0.99
HMGA2-208ENST00000537429 OR7E24Q6IFN5 339 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 LAIR2Q6ISS4 152 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 C11orf40Q8WZ69 217 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 RNASE6Q93091 150 aaKnown RBP21.25■□□□□ 0.99
HMGA2-208ENST00000537429 ZMYND19Q96E35 227 aaPredicted RBP21.25■□□□□ 0.99
HMGA2-208ENST00000537429 MARCH7Q9H992 704 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 MRPL22Q9NWU5 206 aaKnown RBP21.25■□□□□ 0.99
HMGA2-208ENST00000537429 HAO2Q9NYQ3 351 aa21.25■□□□□ 0.99
HMGA2-208ENST00000537429 WARS2Q9UGM6 360 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms