RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SLC22A23A1A5C7 686 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 A6NIZ1 184 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 H7C417 338 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 ACOT8O14734 319 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SSX4O60224 188 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 MGRN1O60291 552 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 OR10H3O60404 316 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 FARS2O95363 451 aaKnown RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SERPINA5P05154 406 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 IGFBP1P08833 259 aaPredicted RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 NR4A1P22736 598 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SMIM11AP58511 58 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 RAP1BP61224 184 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 RAP1AP62834 184 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 MRPS34P82930 218 aaKnown RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 DAG1Q14118 895 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SGCAQ16586 387 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 THEM4Q5T1C6 240 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 FAM205BPQ63HN1 556 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 PGBD2Q6P3X8 592 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 FOXL2NBQ6ZUU3 175 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 PTCHD4Q6ZW05 846 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SVOPLQ8N434 492 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 IL17RDQ8NFM7 739 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 OR9Q2Q8NGE9 314 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 OR4C15Q8NGM1 316 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 FANK1Q8TC84 345 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SLC7A6OSQ96CW6 309 aaPredicted RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF570Q96NI8 536 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 RBP7Q96R05 134 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 GPX7Q96SL4 187 aaPredicted RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 C1orf21Q9H246 121 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 DENND2DQ9H6A0 471 aaPredicted RBP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF442Q9H7R0 627 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 NRIP3Q9NQ35 241 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 GRHPRQ9UBQ7 328 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 IER3IP1Q9Y5U9 82 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
PRKDC-206ENST00000536429 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.59
PRKDC-206ENST00000536429 RTTNQ86VV8 2226 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 IGHV4-30-2A0A087WSY4 118 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 A0A1W2PPL8 197 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 PRSS37A4D1T9 235 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 B9A039 149 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 RNF223E7ERA6 249 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 PPP1R3DO95685 299 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 CTLA4P16410 223 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF32P17041 273 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 FPR3P25089 353 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 LAP3P28838 519 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 SDHAP31040 664 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 GSSP48637 474 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 NUDT6P53370 316 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 CHRNB3Q05901 458 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 KRR1Q13601 381 aaKnown RBP11.35□□□□□ -0.59
PRKDC-206ENST00000536429 RAB35Q15286 201 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 EFNB3Q15768 340 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 MTX3Q5HYI7 312 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 PABPC1L2AQ5JQF8 200 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 LRP11Q86VZ4 500 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF525Q8N782 197 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
PRKDC-206ENST00000536429 SLC30A7Q8NEW0 376 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 AKR7LQ8NHP1 331 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 ASB9Q96DX5 294 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 SORCS2Q96PQ0 1159 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 BTBD10Q9BSF8 475 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 BDH2Q9BUT1 245 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 OR51B6Q9H340 312 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 MUC13Q9H3R2 512 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 EMC7Q9NPA0 242 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 FZR1Q9UM11 496 aa11.35□□□□□ -0.59
PRKDC-206ENST00000536429 ARFGEF3Q5TH69 2177 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 TNFRSF11BO00300 401 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SOCS2O14508 198 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 XKRYO14609 159 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 LY6G6DO95868 133 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 GPANK1O95872 356 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 FAM157BP0CG42 384 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 NPR2P20594 1047 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 APEX1P27695 318 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 CDKN2AP42771 156 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 HMGA2P52926 109 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 ERVS71-1P61550 626 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SNRPD2P62316 118 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 ENDOGQ14249 297 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 RFX4Q33E94 735 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 ZNF770Q6IQ21 691 aaPredicted RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 C1orf94Q6P1W5 598 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 TMEM53Q6P2H8 277 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 PGM2L1Q6PCE3 622 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 DPY19L2P2Q6ZN68 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms