RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 INTS12Q96CB8 462 aaKnown RBP7.16□□□□□ -1.26
COL21A1-212ENST00000535941 C12orf57Q99622 126 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 SLC6A15Q9H2J7 730 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 MRPL22Q9NWU5 206 aaKnown RBP7.16□□□□□ -1.26
COL21A1-212ENST00000535941 MED11Q9P086 117 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 PRSS37A4D1T9 235 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 E9PI62 339 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 DNPH1O43598 174 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 HRGP04196 525 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 MYL12AP19105 171 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 CXCR1P25024 350 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 GRPRP30550 384 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 DSCR4P56555 118 aaPredicted RBP7.16□□□□□ -1.26
COL21A1-212ENST00000535941 TAS2R43P59537 309 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 ACTA2P62736 377 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 ACTG2P63267 376 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 RUNX1T1Q06455 604 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 TATDN3Q17R31 274 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 SLC35F2Q8IXU6 374 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 NLGN4YQ8NFZ3 816 aaPredicted RBP7.16□□□□□ -1.26
COL21A1-212ENST00000535941 UFD1Q92890 307 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 MIB2Q96AX9 1013 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 DDIT4LQ96D03 193 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 PELI1Q96FA3 418 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 ARL5BQ96KC2 179 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 HYLS1Q96M11 299 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 DEFB126Q9BYW3 111 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 CHST11Q9NPF2 352 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 ANKRD10Q9NXR5 420 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 KLHDC2Q9Y2U9 406 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 V9GYH0 126 aa7.16□□□□□ -1.26
COL21A1-212ENST00000535941 AQP7P3A6NL99 342 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 LRRTM2O43300 516 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 GLSO94925 669 aaPredicted RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 HOXD4P09016 255 aaPredicted RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 PAICSP22234 425 aaKnown RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 CLDN6P56747 220 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 EGR3Q06889 387 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 SPEM2Q0P670 501 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 MADCAM1Q13477 382 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 C1DQ13901 141 aaKnown RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 TRIP6Q15654 476 aaKnown RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 SLC35F1Q5T1Q4 408 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 LIPKQ5VXJ0 399 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 CYB5R2Q6BCY4 276 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 C3orf33Q6P1S2 294 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 FAM131AQ6UXB0 335 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 OR51G2Q8NGK0 314 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 OR4K13Q8NH42 304 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 ZNF563Q8TA94 476 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 RGP1Q92546 391 aaPredicted RBP7.15□□□□□ -1.26
COL21A1-212ENST00000535941 NKD1Q969G9 470 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 SMIM19Q96E16 107 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 SGCZQ96LD1 299 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 RNF32Q9H0A6 362 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 ZNF160Q9HCG1 818 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 SPATA2Q9UM82 520 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 B3GALT5Q9Y2C3 310 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 HDGFL3Q9Y3E1 203 aa7.15□□□□□ -1.26
COL21A1-212ENST00000535941 FRYQ5TBA9 3013 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 NSG1A0A0A6YYJ2 146 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 TRBV5-5A0A0J9YX44 114 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 TRAF3IP2O43734 574 aaPredicted RBP7.15□□□□□ -1.27
COL21A1-212ENST00000535941 TMEM127O75204 238 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 SHC1P29353 583 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 GFRA1P56159 465 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 RPS18P62269 152 aaKnown RBP7.15□□□□□ -1.27
COL21A1-212ENST00000535941 CDK5R1Q15078 307 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 INPP5JQ15735 1006 aaPredicted RBP7.15□□□□□ -1.27
COL21A1-212ENST00000535941 C4orf46Q504U0 113 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 TIGD3Q6B0B8 471 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 IGFL2Q6UWQ7 119 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 Q6ZSR3 168 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 GGNQ86UU5 652 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 TMPRSS12Q86WS5 348 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 MDS2Q8NDY4 140 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 ALG12Q9BV10 488 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 ASPNQ9BXN1 380 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 SYNDIG1Q9H7V2 258 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 MCUBQ9NWR8 336 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 PPP4R1LQ9P1A2 415 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 NCDNQ9UBB6 729 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 SESN1Q9Y6P5 492 aa7.15□□□□□ -1.27
COL21A1-212ENST00000535941 LINC00587B1AMM8 73 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 ZNF814B7Z6K7 855 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 GABRPO00591 440 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 TP53I11O14683 189 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 NEURL1O76050 574 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 ALOX5APP20292 161 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 MTNR1BP49286 362 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 CTXN1P60606 82 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 ACKR1Q16570 336 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 BAK1Q16611 211 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 ZMAT1Q5H9K5 638 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 H1FNTQ75WM6 255 aaPredicted RBP7.14□□□□□ -1.27
COL21A1-212ENST00000535941 LHFPL3Q86UP9 236 aa7.14□□□□□ -1.27
COL21A1-212ENST00000535941 ZNF565Q8N9K5 539 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms