RNA–Protein interactions for RNA: ENST00000534961.5

RNF170-209, Transcript of ring finger protein 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF170, Length 4,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-209ENST00000534961 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 SGCEO43556 437 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 MSR1P21757 451 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
RNF170-209ENST00000534961 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
RNF170-209ENST00000534961 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
RNF170-209ENST00000534961 LTBQ06643 244 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 STPG1Q5TH74 334 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 BEST3Q8N1M1 668 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 CCDC120Q96HB5 630 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 TAS2R8Q9NYW2 309 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 CCDC59Q9P031 241 aaKnown RBP13.12□□□□□ -0.31
RNF170-209ENST00000534961 ABRACLQ9P1F3 81 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
RNF170-209ENST00000534961 A0A096LPE4 126 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 TRDV1A0A1B0GX56 115 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 A0A1W2PPZ6 126 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 FFAR1O14842 300 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 LYRM1O43325 122 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 H2AFB2P0C5Z0 115 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 PNLIPP16233 465 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 UBE2UQ5VVX9 321 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 MRI1Q9BV20 369 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ZFP36L2P47974 494 aaKnown RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
RNF170-209ENST00000534961 DESI1Q6ICB0 168 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 IQCF2Q8IXL9 164 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 A0A1W2PQ09 198 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ITGB2P05107 769 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ZNF44P15621 663 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 CLPPQ16740 277 aaPredicted RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 PRSS53Q2L4Q9 553 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 SFXN4Q6P4A7 337 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 NPSR1Q6W5P4 371 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 LRRC28Q86X40 367 aaPredicted RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 BHLHE23Q8NDY6 225 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 TRIB1Q96RU8 372 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
RNF170-209ENST00000534961 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 PAHP00439 452 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 HTR2AP28223 471 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 MAP2K6P52564 334 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ATP1B3P54709 279 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ARL6IP1Q15041 203 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 TBRG1Q3YBR2 411 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 THEM4Q5T1C6 240 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 PARP16Q8N5Y8 322 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 PLPP7Q8NBV4 271 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 SLAMF6Q96DU3 332 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 ZFP64Q9NPA5 681 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 KCNS2Q9ULS6 477 aa13.11□□□□□ -0.31
RNF170-209ENST00000534961 TRAV17A0A0B4J275 112 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 RAB3DO95716 219 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 FCGR2AP12318 317 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 BDKRB2P30411 391 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 SOX18P35713 384 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 RPS19P39019 145 aaKnown RBP13.1□□□□□ -0.31
RNF170-209ENST00000534961 FZD5Q13467 585 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
RNF170-209ENST00000534961 OR2V1Q8NHB1 315 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
RNF170-209ENST00000534961 FOXRED1Q96CU9 486 aaPredicted RBP13.1□□□□□ -0.31
RNF170-209ENST00000534961 MOGAT1Q96PD6 335 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 SLC52A3Q9NQ40 469 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 KCNIP3Q9Y2W7 256 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 PRRG2O14669 202 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 DPM1O60762 260 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 UPK1BO75841 260 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
RNF170-209ENST00000534961 GZMMP51124 257 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 S100A10P60903 97 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 DCDC5Q6ZRR9 648 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 OR51D1Q8NGF3 324 aa13.1□□□□□ -0.31
RNF170-209ENST00000534961 LOXL4Q96JB6 756 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms