RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 IFI44LQ53G44 452 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 MTX3Q5HYI7 312 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 ENTPD8Q5MY95 495 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 GLYATQ6IB77 296 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 PLBD1Q6P4A8 553 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 SHQ1Q6PI26 577 aaKnown RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 PAQR6Q6TCH4 344 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 PTCHD4Q6ZW05 846 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 CYP4Z1Q86W10 505 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 RELL2Q8NC24 303 aaPredicted RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 RBM15BQ8NDT2 890 aaKnown RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 MFSD8Q8NHS3 518 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 ADAMTS16Q8TE57 1224 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 ROBO4Q8WZ75 1007 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 RNASE6Q93091 150 aaKnown RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 SAT2Q96F10 170 aaPredicted RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 SLC19A3Q9BZV2 496 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 GORASP2Q9H8Y8 452 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 DCAF13Q9NV06 445 aaKnown RBP6.76□□□□□ -1.33
CASP4-212ENST00000533730 KLHL13Q9P2N7 655 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 CD300AQ9UGN4 299 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 PROCRQ9UNN8 238 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 SESN1Q9Y6P5 492 aa6.76□□□□□ -1.33
CASP4-212ENST00000533730 HTR3EA5X5Y0 456 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 NKX2-6A6NCS4 301 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 CPSF4LA6NMK7 179 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 GYG2O15488 501 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TPST2O60704 377 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 FZD7O75084 574 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 NCR1O76036 304 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 PLATP00750 562 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 MT-ATP6P00846 226 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 T-ENOLP0DO92 83 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 ATP6V1B1P15313 513 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 NCK1P16333 377 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 ITGA2P17301 1181 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TCN1P20061 433 aaPredicted RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 AGTR1P30556 359 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 RBM34P42696 430 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 TPTEP56180 551 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TAS2R41P59536 307 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SIRPAP78324 504 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 H3F3AP84243 136 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SORDQ00796 357 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TFF3Q07654 80 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 ST3GAL3Q11203 375 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 CEACAM7Q14002 265 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 CDSNQ15517 529 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 OR7A5Q15622 319 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 NPTX1Q15818 432 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 OTUD3Q5T2D3 398 aaPredicted RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 TTC33Q6PID6 262 aaPredicted RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 PLXDC2Q6UX71 529 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 DEF8Q6ZN54 512 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 USP51Q70EK9 711 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 RNF148Q8N7C7 305 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SETD9Q8NE22 299 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 OR4D11Q8NGI4 311 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 ABHD3Q8WU67 409 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 STARD4Q96DR4 205 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SLC41A3Q96GZ6 507 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 PRRC1Q96M27 445 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 NSMCE2Q96MF7 247 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 HS6ST2Q96MM7 605 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 DOCK7Q96N67 2140 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 PSD2Q9BQI7 771 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 SF3B5Q9BWJ5 86 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 RBM24Q9BX46 236 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 UCK2Q9BZX2 261 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 OPA3Q9H6K4 179 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.75□□□□□ -1.33
CASP4-212ENST00000533730 SNTG1Q9NSN8 517 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 ELOVL5Q9NYP7 299 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TAS2R1Q9NYW7 299 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 C6orf203Q9P0P8 240 aaPredicted RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 ACTR3BQ9P1U1 418 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 UPB1Q9UBR1 384 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 SLC7A7Q9UM01 511 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 RASD1Q9Y272 281 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 B3GALT5Q9Y2C3 310 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 FAM32AQ9Y421 112 aaKnown RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
CASP4-212ENST00000533730 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 LRRK2Q5S007 2527 aa6.75□□□□□ -1.33
CASP4-212ENST00000533730 TENM4Q6N022 2769 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 DOPEY2Q9Y3R5 2298 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 IGKV1D-42A0A075B6H8 117 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 IGHV3-15A0A0B4J1V0 119 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 hCG_1809904A0A1W2PP81 198 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 A0A1W2PR64 198 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 FTCDNL1E5RQL4 147 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 ARPC2O15144 300 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 CGAP01215 116 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 IGF2P01344 180 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 COX6B1P14854 86 aa6.74□□□□□ -1.33
CASP4-212ENST00000533730 HOXB6P17509 224 aaKnown RBP6.74□□□□□ -1.33
CASP4-212ENST00000533730 RPS5P46782 204 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms