RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SH3BGRP55822 239 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 TFF3Q07654 80 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 FAM27E3Q08E93 113 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 APOFQ13790 326 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 MAD2L1BPQ15013 274 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 TSC22D1Q15714 1073 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 OCLNQ16625 522 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 FBXL19-AS1Q494R0 122 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 KLHL12Q53G59 568 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 SFRP5Q5T4F7 317 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 LINC01590Q5TEZ4 76 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF813Q6ZN06 617 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 MEPCEQ7L2J0 689 aaKnown RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF627Q7L945 461 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 BHLHA15Q7RTS1 189 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 THAP5Q7Z6K1 395 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 C8orf59Q8N0T1 100 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 CLEC18CQ8NCF0 446 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 SETD9Q8NE22 299 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 PROKR2Q8NFJ6 384 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 APH1BQ8WW43 257 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 HTRA1Q92743 480 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 BCL2L2Q92843 193 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ZNF582Q96NG8 517 aaPredicted RBP10.46□□□□□ -0.73
COMMD9-208ENST00000533643 ANKRD60Q9BZ19 345 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 TMEM38BQ9NVV0 291 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 TAS2R16Q9NYV7 291 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 HSPE1-MOB4S4R3N1 261 aa10.46□□□□□ -0.73
COMMD9-208ENST00000533643 DIDO1Q9BTC0 2240 aaKnown RBP10.46□□□□□ -0.74
COMMD9-208ENST00000533643 TENM4Q6N022 2769 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 A0A096LPE4 126 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 A0A1W2PPL8 197 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 A0A1W2PPZ6 126 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 CIB4A0PJX0 185 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 PRODHO43272 600 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 WBP4O75554 376 aaKnown RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 SEC14L2O76054 403 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 GLCEO94923 617 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 MPZL1O95297 269 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 CLDN14O95500 239 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 TFP02787 698 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 GAAP10253 952 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 PSMB1P20618 241 aaKnown RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 TGFBR3Q03167 851 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 GABRA6Q16445 453 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 KCNMB1Q16558 191 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 SGCAQ16586 387 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 SLC35D3Q5M8T2 416 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 MEDAGQ5VYS4 303 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 NXNL2Q5VZ03 156 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 OTPQ5XKR4 325 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 ANKRD16Q6P6B7 361 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 KLHL24Q6TFL4 600 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 LYPD4Q6UWN0 246 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 B3GLCTQ6Y288 498 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 GID4Q8IVV7 300 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 ZNF511Q8NB15 262 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 OR1K1Q8NGR3 316 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 OR6K6Q8NGW6 343 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 FBLIM1Q8WUP2 373 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 RNASE6Q93091 150 aaKnown RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 KISS1RQ969F8 398 aaPredicted RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 NABP1Q96AH0 204 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 ZMYND19Q96E35 227 aaPredicted RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 BOD1Q96IK1 185 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 TEAD3Q99594 435 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 FOXB1Q99853 325 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 HDHD5Q9BXW7 423 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 NELFAQ9H3P2 528 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 SEC61A2Q9H9S3 476 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 POLE4Q9NR33 117 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 MRPL22Q9NWU5 206 aaKnown RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 CLN6Q9NWW5 311 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 H2AFY2Q9P0M6 372 aaPredicted RBP10.45□□□□□ -0.74
COMMD9-208ENST00000533643 MOKQ9UQ07 419 aa10.45□□□□□ -0.74
COMMD9-208ENST00000533643 TVP23AA6NH52 213 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 C16orf97H3BN30 126 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 DENRO43583 198 aaKnown RBP10.44□□□□□ -0.74
COMMD9-208ENST00000533643 RAD51DO75771 328 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 B4GALT1P15291 398 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 GRNP28799 593 aaKnown RBP10.44□□□□□ -0.74
COMMD9-208ENST00000533643 GSTT1P30711 240 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 HTR1FP30939 366 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 FMO3P31513 532 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 CCKARP32238 428 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 UGT2B10P36537 528 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 GUCA1AP43080 201 aaPredicted RBP10.44□□□□□ -0.74
COMMD9-208ENST00000533643 RPS7P62081 194 aaKnown RBP10.44□□□□□ -0.74
COMMD9-208ENST00000533643 TEKQ02763 1124 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 HSF2Q03933 536 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 GLO1Q04760 184 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 CDK5R2Q13319 367 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 SMN1Q16637 294 aaKnown RBP10.44□□□□□ -0.74
COMMD9-208ENST00000533643 MEP1BQ16820 701 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 HIKESHIQ53FT3 197 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 FAM27BQ5VT28 67 aa10.44□□□□□ -0.74
COMMD9-208ENST00000533643 LAIR2Q6ISS4 152 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms