RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
CAPRIN1-213ENST00000533562 CAPN7Q9Y6W3 813 aa10.65□□□□□ -0.7
CAPRIN1-213ENST00000533562 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 FAM220BPB1ANY3 271 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 B4DSR2 109 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MT-ND5P03915 603 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZNF250P15622 560 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 IL2RGP31785 369 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 APLNRP35414 380 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 GPR6P46095 362 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZNF133P52736 654 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 CDH15P55291 814 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MRPS34P82930 218 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 SF3A3Q12874 501 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MAD2L1BPQ15013 274 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 TRIP10Q15642 601 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 PCGF3Q3KNV8 242 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ALG10Q5BKT4 473 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ARMC4Q5T2S8 1044 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 LIPNQ5VXI9 398 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 TMEM154Q6P9G4 183 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 UNQ6126/PRO20091Q6UXV3 157 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ARPINQ7Z6K5 226 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MICU2Q8IYU8 434 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MOSPD2Q8NHP6 518 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 FNDC8Q8TC99 324 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 SNX33Q8WV41 574 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 BPIFA2Q96DR5 249 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 C1orf159Q96HA4 380 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 RBP7Q96R05 134 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZNF416Q9BWM5 594 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 TXNIPQ9H3M7 391 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 HINT3Q9NQE9 182 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 MYEF2Q9P2K5 600 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-213ENST00000533562 IGLV3-9A0A075B6K5 115 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 MMP7P09237 267 aaPredicted RBP10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 IFI30P13284 250 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 DRD4P21917 467 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 CCNOP22674 350 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 STOMP27105 288 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 CDAP32320 146 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 SRP14P37108 136 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 CD47Q08722 323 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 CCNIQ14094 377 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 SGCAQ16586 387 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 ANKDD1AQ495B1 522 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 THEM4Q5T1C6 240 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 ALDH16A1Q8IZ83 802 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 PAQR4Q8N4S7 273 aaPredicted RBP10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 RP9Q8TA86 221 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 PRRC1Q96M27 445 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 ALG12Q9BV10 488 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 FNDC11Q9BVV2 318 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 OR51B6Q9H340 312 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 A4GNTQ9UNA3 340 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 HIF3AQ9Y2N7 669 aa10.63□□□□□ -0.71
CAPRIN1-213ENST00000533562 ERICH4A6NGS2 130 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 PPIHO43447 177 aaKnown RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 SLC2A10O95528 541 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 CLPTM1O96005 669 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 TFP02787 698 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 IFNW1P05000 195 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 SAGP10523 405 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 DVL1P1P54792 670 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 RPL27P61353 136 aaKnown RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 PCBD1P61457 104 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 TEKQ02763 1124 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZSCAN26Q16670 478 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 HSP90B2PQ58FF3 399 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 PABPC1L2AQ5JQF8 200 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 FAM205BPQ63HN1 556 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 OAFQ86UD1 273 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 C1orf174Q8IYL3 243 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 RNF113BQ8IZP6 322 aaKnown RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 ICA1LQ8NDH6 482 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 CPEB3Q8NE35 698 aaKnown RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 NSMAFQ92636 917 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 HDAC2Q92769 488 aaKnown RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 RCN3Q96D15 328 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 HOPXQ9BPY8 73 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 DECR2Q9NUI1 292 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 NKIRAS2Q9NYR9 191 aa10.62□□□□□ -0.71
CAPRIN1-213ENST00000533562 C5orf49A4QMS7 147 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 A6NIZ1 184 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 NDUFAB1O14561 156 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 GSTA4O15217 222 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 CCDC22O60826 627 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 IGHV3-13P01766 116 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 ANPEPP15144 967 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 ZNF32P17041 273 aa10.61□□□□□ -0.71
CAPRIN1-213ENST00000533562 GCH1P30793 250 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms