RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 LRRC17Q8N6Y2 441 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 OR6N1Q8NGY5 312 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 OR6X1Q8NH79 312 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 CENPNQ96H22 339 aaPredicted RBP9.76□□□□□ -0.85
CLCF1-202ENST00000533438 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 MPP4Q96JB8 637 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 PRSS27Q9BQR3 290 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 SLC19A3Q9BZV2 496 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 RAB1BQ9H0U4 201 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 MEPEQ9NQ76 525 aaPredicted RBP9.76□□□□□ -0.85
CLCF1-202ENST00000533438 NANSQ9NR45 359 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
CLCF1-202ENST00000533438 POFUT2Q9Y2G5 429 aa9.76□□□□□ -0.85
CLCF1-202ENST00000533438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLCF1-202ENST00000533438 IGHV4-61A0A0C4DH41 118 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 VSTM5A8MXK1 200 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 LMX1BO60663 402 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 SERPINI2O75830 405 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 DIRAS1O95057 198 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 BAG2O95816 211 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 THRBP10828 461 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 GIFP27352 417 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 IFNA8P32881 189 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 YAP1P46937 504 aaKnown RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 CSNK1A1P48729 337 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 HMGA2P52926 109 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 SMIM11AP58511 58 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 SLC34A1Q06495 639 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 PIGFQ07326 219 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 PIN1Q13526 163 aaPredicted RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 AMIGO2Q86SJ2 522 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF584Q8IVC4 421 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 CDK20Q8IZL9 346 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 ZCCHC24Q8N2G6 241 aaKnown RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 NEU4Q8WWR8 484 aaPredicted RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 MRPL24Q96A35 216 aaKnown RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 MSI2Q96DH6 328 aaKnown RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 BPESC1Q9GZL8 116 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 RASSF4Q9H2L5 321 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 ANKRD19PQ9H560 264 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 NMNAT1Q9HAN9 279 aaPredicted RBP9.75□□□□□ -0.85
CLCF1-202ENST00000533438 NTN4Q9HB63 628 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 GLTPQ9NZD2 209 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 LPAR3Q9UBY5 353 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF229Q9UJW7 825 aa9.75□□□□□ -0.85
CLCF1-202ENST00000533438 A0A1W2PRQ8 180 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 KPNA4O00629 521 aaPredicted RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 CASQ2O14958 399 aaPredicted RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 RNF13O43567 381 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 UBL3O95164 117 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 OR6A2O95222 327 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 IGF2P01344 180 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 H1F0P07305 194 aaKnown RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 APEHP13798 732 aaKnown RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 DAOP14920 347 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF23P17027 643 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 IGFBP5P24593 272 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 RRM2P31350 389 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 LIMS1P48059 325 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 PTDSS1P48651 473 aaKnown RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 EVX1P49640 407 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 TAS2R41P59536 307 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 RAB1AP62820 205 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SPIBQ01892 262 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 ST3GAL3Q11203 375 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 DGCR6Q14129 220 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 MELKQ14680 651 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 CARTPTQ16568 116 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 LRFN4Q6PJG9 635 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SKA3Q8IX90 412 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF540Q8NDQ6 660 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 OR4C15Q8NGM1 316 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 FGFBP3Q8TAT2 258 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 ZNF566Q969W8 418 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SLC25A44Q96H78 314 aaPredicted RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 FUZQ9BT04 418 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SOX7Q9BT81 388 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 FNDC11Q9BVV2 318 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 MRPL37Q9BZE1 423 aaKnown RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 REEP1Q9H902 201 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 MAN2C1Q9NTJ4 1040 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 VNN3Q9NY84 501 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SAMHD1Q9Y3Z3 626 aaKnown RBP9.74□□□□□ -0.85
CLCF1-202ENST00000533438 CMAHPQ9Y471 501 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 LYVE1Q9Y5Y7 322 aa9.74□□□□□ -0.85
CLCF1-202ENST00000533438 SH3PXD2BA1X283 911 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 TNFRSF11BO00300 401 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 GNGT2O14610 69 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 DHHO43323 396 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 GADD45GO95257 159 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 RAB36O95755 333 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 ERCC1P07992 297 aaPredicted RBP9.73□□□□□ -0.85
CLCF1-202ENST00000533438 TACSTD2P09758 323 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 TSPAN19P0C672 248 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 FUT4P22083 530 aa9.73□□□□□ -0.85
CLCF1-202ENST00000533438 GLRXP35754 106 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms