RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 RFLNBQ8N5W9 214 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 PNLDC1Q8NA58 520 aaKnown RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 RCBTB1Q8NDN9 531 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 PAQR8Q8TEZ7 354 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 OIT3Q8WWZ8 545 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 C3orf49Q96BT1 292 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 TMEM41AQ96HV5 264 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 SEC22AQ96IW7 307 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 C4orf45Q96LM5 186 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ULBP3Q9BZM4 244 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 TRAV36DV7A0A075B6V5 113 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 A8MXK9 166 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 PIN1P1O15428 100 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 RAD1O60671 282 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 CTSVO60911 334 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 WNT11O96014 354 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 GUSBP08236 651 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ENPP1P22413 925 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 MAOBP27338 520 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 YPEL5P62699 121 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 SLC17A1Q14916 467 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ELOCQ15369 112 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ZNF74Q16587 644 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 DEFB110Q30KQ9 67 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 TRAPPC6BQ86SZ2 158 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 KCNRGQ8N5I3 272 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 OR2AJ1Q8NGZ0 328 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 BMFQ96LC9 184 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 TSSK2Q96PF2 358 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 URM1Q9BTM9 101 aaKnown RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 CHMP1AQ9HD42 196 aaPredicted RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 STARD5Q9NSY2 213 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 PIPOXQ9P0Z9 390 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 ZNF629Q9UEG4 869 aaPredicted RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 MRM2Q9UI43 246 aaKnown RBP8.55□□□□□ -1.04
BDNF-216ENST00000532997 HIF3AQ9Y2N7 669 aa8.55□□□□□ -1.04
BDNF-216ENST00000532997 TNFSF14O43557 240 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 PLRG1O43660 514 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 MT-ATP6P00846 226 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 POU2F2P09086 479 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 VSIG10L2P0DP72 767 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ACHEP22303 614 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ACAA2P42765 397 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 TNFRSF4P43489 277 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 MAT1AQ00266 395 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 GUCA2AQ02747 115 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 RPL18Q07020 188 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 AWAT2Q6E213 333 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 BCORP1Q8N888 145 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 PLPP7Q8NBV4 271 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 OR4K17Q8NGC6 315 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 SLC41A2Q96JW4 573 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZC3H10Q96K80 434 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 LRIT1Q9P2V4 623 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 C14orf166Q9Y224 244 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 SCN5AQ14524 2016 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 OR4C45A6NMZ5 311 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZNF705EA8MWA4 302 aaPredicted RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 C17orf105B2RV13 164 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 CBX7O95931 251 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 PLGP00747 810 aaPredicted RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 TBPP20226 339 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 CALCRP30988 508 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 CSF2RBP32927 897 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ADPRHP54922 357 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 SPOCK1Q08629 439 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZNF345Q14585 488 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 SLC35D2Q76EJ3 337 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 LYG2Q86SG7 212 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 EIF4E3Q8N5X7 224 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 OR5M8Q8NGP6 311 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 TM4SF19Q96DZ7 209 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 OR8B4Q96RC9 309 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 OR2S2Q9NQN1 319 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 MSRAQ9UJ68 235 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 UTRNP46939 3433 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 TRBV5-5A0A0J9YX44 114 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 TCRBV16S1A1N1A0A5B0 115 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 C1orf196B1AJZ1 125 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 STK17BO94768 372 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 KLF8O95600 359 aaPredicted RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 HOXC4P09017 264 aaPredicted RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 IL9P15248 144 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 PGAM2P15259 253 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZNF28P17035 718 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 HSD11B1P28845 292 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 CDKN2AP42771 156 aaKnown RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 MAGEB1P43366 347 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 S100A10P60903 97 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 FHL5Q5TD97 284 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZNF660Q6AZW8 331 aaPredicted RBP8.54□□□□□ -1.04
BDNF-216ENST00000532997 ZNF585AQ6P3V2 769 aa8.54□□□□□ -1.04
BDNF-216ENST00000532997 C5orf46Q6UWT4 87 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms