RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ECI1P42126 302 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 SYT9Q86SS6 491 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 ITPKCQ96DU7 683 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 POLDIP2Q9Y2S7 368 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 HMGN4O00479 90 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 ARR3P36575 388 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 PAN3Q58A45 887 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 FCRL6Q6DN72 434 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 DOK3Q7L591 496 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 NAXDQ8IW45 347 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 DND1Q8IYX4 353 aaKnown RBP13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 SCCPDHQ8NBX0 429 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 SEMA6DQ8NFY4 1073 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 OR2M2Q96R28 347 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 LAT2Q9GZY6 243 aa13.53□□□□□ -0.24
PCDHA9-202ENST00000532602 CCDC163A0A0D9SF12 145 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 A0A1W2PNR3 127 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 SULT1C2O00338 296 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 OR2J2O76002 312 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 RPS25P62851 125 aaKnown RBP13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 B4GALNT1Q00973 533 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 RNLSQ5VYX0 342 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 GUSBP11Q6P575 273 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 APOOLQ6UXV4 268 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 NKAIN4Q8IVV8 208 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 OR51A2Q8NGJ7 313 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 OR52N1Q8NH53 320 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 ABHD4Q8TB40 342 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 RBMXL1Q96E39 390 aaKnown RBP13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 UHRF2Q96PU4 802 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 M0R082 166 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 SCAF4O95104 1147 aaKnown RBP13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 ETHE1O95571 254 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF728P0DKX0 622 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 NAGAP17050 411 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 RBMXL3Q8N7X1 1067 aaKnown RBP13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 FAM71CQ8NEG0 241 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 WNT16Q9UBV4 365 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 RAB22AQ9UL26 194 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.24
PCDHA9-202ENST00000532602 KIR2DS1A0A191URI9 304 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 CSO75390 466 aaKnown RBP13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 BCKDHBP21953 392 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 TNFSF8P32971 234 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 KIR2DS4P43632 304 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 HCCSP53701 268 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 HSF1Q00613 529 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 AKR1C1Q04828 323 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 ACSM1Q08AH1 577 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 KIR2DS1Q14954 304 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC9A3R2Q15599 337 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 SAXO2Q658L1 398 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 SPRED1Q7Z699 444 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 OR56B4Q8NH76 319 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 SDF2Q99470 211 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PSORS1C1Q9UIG5 152 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 EVI2BP34910 448 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 RAP2BP61225 183 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 CLN3Q13286 438 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PEA15Q15121 130 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PTRH1Q86Y79 214 aaKnown RBP13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 RNF170Q96K19 258 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 Q96M85 177 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 IER2Q9BTL4 223 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PLXNB2O15031 1838 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 IGHV3-64DA0A0J9YX35 117 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 C7orf72A4D263 438 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 FABP1P07148 127 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 CHRM2P08172 466 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 ZGLP1P0C6A0 271 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 DBPQ10586 325 aaPredicted RBP13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 MYBPHQ13203 477 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 OR5AS1Q8N127 324 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 BBS1Q8NFJ9 593 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 EMG1Q92979 244 aaKnown RBP13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 FGGYQ96C11 551 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 PIGLQ9Y2B2 252 aa13.52□□□□□ -0.25
PCDHA9-202ENST00000532602 RFPL3O75679 317 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 TGM6O95932 706 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 APOA2P02652 100 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 GRPP07492 148 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 FRZBQ92765 325 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 TAAR9Q96RI9 348 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ATP23Q9Y6H3 246 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 TRGV8A0A0C4DH27 118 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 IHHQ14623 411 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ADGRE4PQ86SQ3 457 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 KIAA1958Q8N8K9 716 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms