RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TEX29Q8N6K0 151 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 LSMEM1Q8N8F7 131 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 OR4K5Q8NGD3 323 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 OR1J1Q8NGS3 322 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 FAM110DQ8TAY7 271 aaPredicted RBP7.55□□□□□ -1.2
USF1-210ENST00000531842 ST7LQ8TDW4 575 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 STON2Q8WXE9 905 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 SLC47A1Q96FL8 570 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 TIMD4Q96H15 378 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 RBM4BQ9BQ04 359 aaKnown RBP7.55□□□□□ -1.2
USF1-210ENST00000531842 RNF121Q9H920 327 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 C12orf10Q9HB07 376 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 CDH20Q9HBT6 801 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
USF1-210ENST00000531842 CCDC167Q9P0B6 97 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 INSIG2Q9Y5U4 225 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 COL7A1Q02388 2944 aa7.55□□□□□ -1.2
USF1-210ENST00000531842 NOTCH3Q9UM47 2321 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 TRAV40A0A0B4J280 105 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 LOC102725191A0A1B0GVB3 256 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 FBP2O00757 339 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 POLR3GO15318 223 aaPredicted RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 TPST2O60704 377 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 ALX3O95076 343 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 IGHV2-70P01814 119 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 SLC6A2P23975 617 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 RGS8P57771 180 aaPredicted RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 GUCY1A3Q02108 690 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.23e-6■■■■□ 23.4
USF1-210ENST00000531842 OR1Q1Q15612 314 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 AGKQ53H12 422 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 FAM91A1Q658Y4 838 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 RUSC1-AS1Q66K80 236 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 C16orf87Q6PH81 154 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 FIP1L1Q6UN15 594 aaKnown RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 RANBP3LQ86VV4 465 aaPredicted RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 PARP8Q8N3A8 854 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 CPEB3Q8NE35 698 aaKnown RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 OR52E2Q8NGJ4 325 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 ZNF519Q8TB69 540 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 C11orf40Q8WZ69 217 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 POP5Q969H6 163 aaKnown RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 SLC41A3Q96GZ6 507 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 ZNF607Q96SK3 696 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 CITED1Q99966 193 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 POFUT1Q9H488 388 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 NKIRAS2Q9NYR9 191 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 C1RLQ9NZP8 487 aa7.54□□□□□ -1.2
USF1-210ENST00000531842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.54□□□□□ -1.2
USF1-210ENST00000531842 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 TET2Q6N021 2002 aaPredicted RBP7.53□□□□□ -1.2
USF1-210ENST00000531842 IGHV3-64DA0A0J9YX35 117 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 EVPLLA8MZ36 301 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 G3V4G9 280 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 PLPP3O14495 311 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 FOXH1O75593 365 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 NGFP01138 241 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 IGHV3-13P01766 116 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 IGHMP01871 453 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 GPX2P18283 190 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 DRD4P21917 467 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 GATA3P23771 443 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 CDAP32320 146 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 SLC6A9P48067 706 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 GZMMP51124 257 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 CDH12P55289 794 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 RAG2P55895 527 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 HOXA4Q00056 320 aaPredicted RBP7.53□□□□□ -1.2
USF1-210ENST00000531842 TEKQ02763 1124 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 PUDPQ08623 228 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 SCARB2Q14108 478 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 ZMYND11Q15326 602 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 RUNDC3AQ59EK9 446 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 DHRS4L2Q6PKH6 230 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 RFPL4BQ6ZWI9 263 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 PXKQ7Z7A4 578 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 PTOV1Q86YD1 416 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 ARMC8Q8IUR7 673 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 ADPRHL1Q8NDY3 354 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 AKR7LQ8NHP1 331 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 SLC25A40Q8TBP6 338 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 DYDC1Q8WWB3 177 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 LRR1Q96L50 414 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 ZNF347Q96SE7 839 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 GPA33Q99795 319 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 CHIAQ9BZP6 476 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 OR2J1Q9GZK6 312 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 MMP27Q9H306 513 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 PATZ1Q9HBE1 687 aaKnown RBP7.53□□□□□ -1.2
USF1-210ENST00000531842 FGFR1OP2Q9NVK5 253 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms