RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LCN6P62502 163 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ESRRGP62508 458 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 DAG1Q14118 895 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 LRRC36Q1X8D7 754 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 BEX5Q5H9J7 111 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 NCMAPQ5T1S8 102 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 TTC23Q5W5X9 447 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ZNF813Q6ZN06 617 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ZNF555Q8NEP9 628 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
CPSF1-206ENST00000531480 CIB1Q99828 191 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 SYT4Q9H2B2 425 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 SIAEQ9HAT2 523 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 SLC25A19Q9HC21 320 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 NGBQ9NPG2 151 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 LRRC42Q9Y546 428 aa12.63□□□□□ -0.39
CPSF1-206ENST00000531480 A0A096LPE4 126 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 IGLV1-36A0A0B4J1U3 117 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-206ENST00000531480 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 OR6C68A6NDL8 312 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 SAC3D1A6NKF1 404 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 E9PQ18 207 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 OR8G3PP0DMU2 310 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 B4GALT1P15291 398 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 NPR2P20594 1047 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 PEX2P28328 305 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 HOXC12P31275 282 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 CRISP1P54107 249 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 NR1H2P55055 460 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 TLE4Q04727 773 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 KLHL24Q6TFL4 600 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 WFDC8Q8IUA0 241 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 TEX47Q8TBZ9 253 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 NMNAT3Q96T66 252 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 NMNAT2Q9BZQ4 307 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 CMC2Q9NRP2 79 aa12.62□□□□□ -0.39
CPSF1-206ENST00000531480 SMPD3Q9NY59 655 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-206ENST00000531480 HEATR1Q9H583 2144 aaKnown RBP12.61□□□□□ -0.39
CPSF1-206ENST00000531480 PDZD2O15018 2839 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 A0A1W2PPR1 153 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 A0A1W2PR80 420 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 H3BN98 237 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 DCTN6O00399 190 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 SEC14L2O76054 403 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 ALPLP05186 524 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
CPSF1-206ENST00000531480 CBR1P16152 277 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 NOS3P29474 1203 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 CRABP1P29762 137 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 UBE2NP61088 152 aaKnown RBP12.61□□□□□ -0.39
CPSF1-206ENST00000531480 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPSF1-206ENST00000531480 MED21Q13503 144 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 ETFDHQ16134 617 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 KCNMB1Q16558 191 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 ACSM5Q6NUN0 579 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 LEG1Q6P5S2 330 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 JAZF1Q86VZ6 243 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 OR6V1Q8N148 313 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 GALNT4Q8N4A0 578 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 DHRSXQ8N5I4 330 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 GABARAPL3Q9BY60 117 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 KRT84Q9NSB2 600 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 KLHL21Q9UJP4 597 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 FKBP7Q9Y680 259 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 MYO9AB2RTY4 2548 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 CREBBPQ92793 2442 aa12.61□□□□□ -0.39
CPSF1-206ENST00000531480 H0YAE9 185 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 SLC16A7O60669 478 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 MITFO75030 526 aaPredicted RBP12.6□□□□□ -0.39
CPSF1-206ENST00000531480 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
CPSF1-206ENST00000531480 UBL3O95164 117 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
CPSF1-206ENST00000531480 GAAP10253 952 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 PTAFRP25105 342 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 CDAP32320 146 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 ARR3P36575 388 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 SLC25A1P53007 311 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 GINS1Q14691 196 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 PTGES3Q15185 160 aaKnown RBP12.6□□□□□ -0.39
CPSF1-206ENST00000531480 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 ADAM5Q6NVV9 412 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 GLB1L2Q8IW92 636 aa12.6□□□□□ -0.39
CPSF1-206ENST00000531480 SLC37A3Q8NCC5 494 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms