RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 C1QL2Q7Z5L3 287 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 PFN4Q8NHR9 129 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 NSMAFQ92636 917 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 TAMM41Q96BW9 452 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 ELMOD3Q96FG2 381 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 G6PC2Q9NQR9 355 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 INIPQ9NRY2 104 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 NKIRAS2Q9NYR9 191 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 CACNG2Q9Y698 323 aa13.48□□□□□ -0.25
CHMP4A-204ENST00000530996 C5orf49A4QMS7 147 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 OR7A10O76100 309 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 LYPD3O95274 346 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 IGHV2-5P01817 119 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 MAKP20794 623 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 CDAP32320 146 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 NRN1LQ496H8 165 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 AGBL2Q5U5Z8 902 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 UNQ6126/PRO20091Q6UXV3 157 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 CPEB3Q8NE35 698 aaKnown RBP13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 OR10A6Q8NH74 314 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 FAM216AQ8WUB2 273 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 TMEM255BQ8WV15 326 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 ASB10Q8WXI3 467 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 CCL17Q92583 94 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 SGTBQ96EQ0 304 aa13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 STX18Q9P2W9 335 aaKnown RBP13.47□□□□□ -0.25
CHMP4A-204ENST00000530996 J3QLI3 93 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 NR2C1P13056 603 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 ACADSP16219 412 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 STOMP27105 288 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 MPV17P39210 176 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 AQP2P41181 271 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 LIMS1P48059 325 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 GDI2P50395 445 aaKnown RBP13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 UGT2B15P54855 530 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 LCN2P80188 198 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 FMODQ06828 376 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 SGCAQ16586 387 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 ZNF718Q3SXZ3 478 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 C1orf229Q6ZS94 237 aaPredicted RBP13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 USP43Q70EL4 1123 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 RETREG3Q86VR2 466 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 TREML1Q86YW5 311 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 AKR7LQ8NHP1 331 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 ABHD4Q8TB40 342 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 NANPQ8TBE9 248 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 TMPRSS13Q9BYE2 586 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 EGLN1Q9GZT9 426 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 SH3GLB1Q9Y371 365 aa13.46□□□□□ -0.25
CHMP4A-204ENST00000530996 GMNCA6NCL1 334 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 SHOX2O60902 331 aaPredicted RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 DEAF1O75398 565 aaPredicted RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 AVPP01185 164 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 IGHV3-13P01766 116 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 MT-ND1P03886 318 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ZNF32P17041 273 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 TNFRSF1BP20333 461 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ERVK-25P63136 954 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 MRPS34P82930 218 aaKnown RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 TAF11Q15544 211 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ZMAT1Q5H9K5 638 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 FAM209AQ5JX71 171 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 THEM4Q5T1C6 240 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ZNF101Q8IZC7 436 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 DPP10Q8N608 796 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 MOSPD2Q8NHP6 518 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ST7LQ8TDW4 575 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 C22orf15Q8WYQ4 148 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ZNF426Q9BUY5 554 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 PCDHAC1Q9H158 963 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 KAT8Q9H7Z6 458 aaKnown RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 SIAEQ9HAT2 523 aa13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 MEPEQ9NQ76 525 aaPredicted RBP13.45□□□□□ -0.26
CHMP4A-204ENST00000530996 ZSCAN5BA6NJL1 495 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 FUT1P19526 365 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 RBM34P42696 430 aaKnown RBP13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 GUCA1AP43080 201 aaPredicted RBP13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 COMPP49747 757 aaPredicted RBP13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 HIST3H3Q16695 136 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 VMACQ2NL98 169 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 C10orf128Q5T292 105 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 RBMS3Q6XE24 437 aaKnown RBP13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 RFPL4BQ6ZWI9 263 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 NKAIN4Q8IVV8 208 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 SLC25A40Q8TBP6 338 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 TMEM239Q8WW34 195 aa13.44□□□□□ -0.26
CHMP4A-204ENST00000530996 PRSS27Q9BQR3 290 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms