RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SSX6Q7RTT6 188 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ZNF679Q8IYX0 411 aa5□□□□□ -1.61
PCF11-205ENST00000530906 PRR22Q8IZ63 422 aa5□□□□□ -1.61
PCF11-205ENST00000530906 YIPF7Q8N8F6 280 aa5□□□□□ -1.61
PCF11-205ENST00000530906 OR5AK2Q8NH90 309 aa5□□□□□ -1.61
PCF11-205ENST00000530906 IFI44Q8TCB0 444 aa5□□□□□ -1.61
PCF11-205ENST00000530906 GPR148Q8TDV2 347 aa5□□□□□ -1.61
PCF11-205ENST00000530906 DUSP19Q8WTR2 217 aa5□□□□□ -1.61
PCF11-205ENST00000530906 PIGKQ92643 395 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ADAD1Q96M93 576 aaKnown RBP5□□□□□ -1.61
PCF11-205ENST00000530906 GUCD1Q96NT3 240 aa5□□□□□ -1.61
PCF11-205ENST00000530906 DERL3Q96Q80 235 aa5□□□□□ -1.61
PCF11-205ENST00000530906 OR8B4Q96RC9 309 aa5□□□□□ -1.61
PCF11-205ENST00000530906 WDR77Q9BQA1 342 aaPredicted RBP5□□□□□ -1.61
PCF11-205ENST00000530906 ZPBPQ9BS86 351 aa5□□□□□ -1.61
PCF11-205ENST00000530906 MARVELD1Q9BSK0 173 aa5□□□□□ -1.61
PCF11-205ENST00000530906 WACQ9BTA9 647 aa5□□□□□ -1.61
PCF11-205ENST00000530906 OR2B2Q9GZK3 357 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ACTR6Q9GZN1 396 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ZNF700Q9H0M5 742 aa5□□□□□ -1.61
PCF11-205ENST00000530906 C11orf54Q9H0W9 315 aaPredicted RBP5□□□□□ -1.61
PCF11-205ENST00000530906 ABCG5Q9H222 651 aa5□□□□□ -1.61
PCF11-205ENST00000530906 GAREM1Q9H706 876 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ZNF552Q9H707 407 aaPredicted RBP5□□□□□ -1.61
PCF11-205ENST00000530906 PTGES2Q9H7Z7 377 aa5□□□□□ -1.61
PCF11-205ENST00000530906 GCM1Q9NP62 436 aa5□□□□□ -1.61
PCF11-205ENST00000530906 CHST11Q9NPF2 352 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ACOXLQ9NUZ1 547 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ALKBH4Q9NXW9 302 aa5□□□□□ -1.61
PCF11-205ENST00000530906 PPP4R1LQ9P1A2 415 aa5□□□□□ -1.61
PCF11-205ENST00000530906 KLHL9Q9P2J3 617 aa5□□□□□ -1.61
PCF11-205ENST00000530906 MYOTQ9UBF9 498 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ZNF221Q9UK13 617 aa5□□□□□ -1.61
PCF11-205ENST00000530906 ZNF346Q9UL40 294 aaKnown RBP5□□□□□ -1.61
PCF11-205ENST00000530906 COPS3Q9UNS2 423 aa5□□□□□ -1.61
PCF11-205ENST00000530906 RPH3AQ9Y2J0 694 aaPredicted RBP5□□□□□ -1.61
PCF11-205ENST00000530906 WIF1Q9Y5W5 379 aa5□□□□□ -1.61
PCF11-205ENST00000530906 C5orf42Q9H799 3197 aa5□□□□□ -1.61
PCF11-205ENST00000530906 RANBP2P49792 3224 aaKnown RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 TRIOBPQ9H2D6 2365 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 PI4KAP42356 2102 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CPAMD8Q8IZJ3 1885 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CABIN1Q9Y6J0 2220 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 TRBV5-7A0A0A0MS05 114 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 TRBV11-1A0A0K0K1C0 115 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 TMEM72A0PK05 275 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 SLC22A23A1A5C7 686 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 MEIOCA2RUB1 952 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR4C45A6NMZ5 311 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 IFITM5A6NNB3 132 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 B4DXG7 233 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 NPIPA5E9PKD4 350 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 PLA2G10O15496 165 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 DNPH1O43598 174 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CCNKO75909 580 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZFPL1O95159 310 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ECDO95905 644 aaPredicted RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 CFIP05156 583 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CD2P06729 351 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ICAM2P13598 275 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 SLC6A1P30531 599 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 RIDAP52758 137 aaKnown RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 EFNA3P52797 238 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 TPTEP56180 551 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CLDN20P56880 219 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CSTF1Q05048 431 aaKnown RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 CBX3Q13185 183 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 SELENBP1Q13228 472 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 COL9A2Q14055 689 aaPredicted RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 CEP78Q5JTW2 689 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 PHF19Q5T6S3 580 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 PRAMEF17Q5VTA0 474 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 LIPNQ5VXI9 398 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 RPTNQ6XPR3 784 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZNF704Q6ZNC4 412 aaPredicted RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 NR2C2APQ86WQ0 139 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 C1orf210Q8IVY1 113 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 PRSS58Q8IYP2 241 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR6V1Q8N148 313 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZNF676Q8N7Q3 588 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR4M1Q8NGD0 313 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR51L1Q8NGJ5 315 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR6N2Q8NGY6 317 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR2G2Q8NGZ5 317 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR6F1Q8NGZ6 308 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZNF671Q8TAW3 534 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 M1APQ8TC57 530 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZPLD1Q8TCW7 415 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ELP5Q8TE02 316 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 RNF128Q8TEB7 428 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 SMIM4Q8WVI0 70 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 TRIM63Q969Q1 353 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 ZBTB8AQ96BR9 441 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 SPACA9Q96E40 222 aaPredicted RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 LOXL4Q96JB6 756 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 C4orf45Q96LM5 186 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 OR14A2Q96R54 314 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 CMKLR1Q99788 373 aa4.99□□□□□ -1.61
PCF11-205ENST00000530906 THAP7Q9BT49 309 aaPredicted RBP4.99□□□□□ -1.61
PCF11-205ENST00000530906 DEFB126Q9BYW3 111 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms