RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TGFBR1P36897 503 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 OR12D2P58182 307 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CLRN1P58418 232 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ACTA2P62736 377 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ACTG2P63267 376 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CAMK2DQ13557 499 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 SOWAHCQ53LP3 525 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 HDDC2Q7Z4H3 204 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 OR6N2Q8NGY6 317 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 OR6X1Q8NH79 312 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 WDYHV1Q96HA8 205 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 INTS14Q96SY0 518 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 MRPL13Q9BYD1 178 aaKnown RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PRDM14Q9GZV8 571 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 WDR76Q9H967 626 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 COA3Q9Y2R0 106 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF407Q9C0G0 2248 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF670-ZNF695F2Z2N8 137 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 MAGEB4O15481 346 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 GPX5O75715 221 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PRB1P04280 392 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PGA4P0DJD7 388 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PGA3P0DJD8 388 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PTGS2P35354 604 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 BLVRAP53004 296 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CLDN17P56750 224 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 BDH1Q02338 343 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 HSF2Q03933 536 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 SRYQ05066 204 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 POU4F3Q15319 338 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CREB3L2Q70SY1 520 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CDC20BQ86Y33 519 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 MEIOBQ8N635 442 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 OR9K2Q8NGE7 335 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 SNX33Q8WV41 574 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 MRPL48Q96GC5 212 aaKnown RBP12.79□□□□□ -0.36
TTC39A-216ENST00000530004 CENPOQ9BU64 300 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 MARCH7Q9H992 704 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 TRIM36Q9NQ86 728 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 STUB1Q9UNE7 303 aa12.79□□□□□ -0.36
TTC39A-216ENST00000530004 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 IGKV1D-43A0A0B4J1Z2 117 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 LRRTM2O43300 516 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
TTC39A-216ENST00000530004 CELP19835 753 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 GLO1Q04760 184 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 SLC17A1Q14916 467 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 C3AR1Q16581 482 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 CDONQ4KMG0 1287 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 OTPQ5XKR4 325 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 VASH1Q7L8A9 365 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-216ENST00000530004 DPY19L4Q7Z388 723 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 SYS1Q8N2H4 156 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 ADAD1Q96M93 576 aaKnown RBP12.78□□□□□ -0.36
TTC39A-216ENST00000530004 RBP7Q96R05 134 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 MRPL22Q9NWU5 206 aaKnown RBP12.78□□□□□ -0.36
TTC39A-216ENST00000530004 KLHDC2Q9Y2U9 406 aa12.78□□□□□ -0.36
TTC39A-216ENST00000530004 KMT2BQ9UMN6 2715 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-216ENST00000530004 DNAJC13O75165 2243 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 B8ZZF3 427 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 E9PI62 339 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 RPS27P42677 84 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 CRYBB2P43320 205 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 CAPZA2P47755 286 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 RPS25P62851 125 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 LSAMPQ13449 338 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 THEM4Q5T1C6 240 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 ST6GALNAC3Q8NDV1 305 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 NSMAFQ92636 917 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 CPNE4Q96A23 557 aaPredicted RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF845Q96IR2 970 aaPredicted RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 ZNF385AQ96PM9 386 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 MNTQ99583 582 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 SF3B5Q9BWJ5 86 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 EXOSC4Q9NPD3 245 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 LAMP5Q9UJQ1 280 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 GNG8Q9UK08 70 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 CAMK2AQ9UQM7 478 aa12.77□□□□□ -0.36
TTC39A-216ENST00000530004 SF3B6Q9Y3B4 125 aaKnown RBP12.77□□□□□ -0.36
TTC39A-216ENST00000530004 PRR32B1ATL7 298 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 PSMD9O00233 223 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-216ENST00000530004 MPZL1O95297 269 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 PSKH1P11801 424 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 ABOP16442 354 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 GABRA5P31644 462 aa12.76□□□□□ -0.37
TTC39A-216ENST00000530004 TAS2R43P59537 309 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms