RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CHMP5Q9NZZ3 219 aa3.14□□□□□ -1.91
C11orf88-204ENST00000529661 C15orf41Q9Y2V0 281 aa3.14□□□□□ -1.91
C11orf88-204ENST00000529661 RLFQ13129 1914 aa3.14□□□□□ -1.91
C11orf88-204ENST00000529661 CHD4Q14839 1912 aa3.14□□□□□ -1.91
C11orf88-204ENST00000529661 KCNE1BA0A087WTH5 132 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 A0A0G2JN53 185 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 KBTBD11-OT1A0A1B0GTJ5 212 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RBMY1BA6NDE4 496 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RBMY1EA6NEQ0 496 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 IQCF5A8MTL0 148 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 SERPINE3A8MV23 424 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 OR2J3O76001 311 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 SERPINE2P07093 398 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RBMY1DP0C7P1 496 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RBMY1A1P0DJD3 496 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 TDGF1P13385 188 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 ICAM2P13598 275 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 HTR1EP28566 365 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 GTF2E2P29084 291 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RBMXP38159 391 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CTRLP40313 264 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 TDGF1P3P51864 188 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 HSDL1Q3SXM5 330 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 TMEM135Q86UB9 458 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 LHFPL3Q86UP9 236 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 RALGPS2Q86X27 583 aaPredicted RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 MMAAQ8IVH4 418 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF557Q8N988 423 aaPredicted RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 NDNFQ8TB73 568 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 LRRC20Q8TCA0 184 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CD300LFQ8TDQ1 290 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 ASB9Q96DX5 294 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CERS2Q96G23 380 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 SLC35E1Q96K37 410 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 IMMP1LQ96LU5 166 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 KCTD14Q9BQ13 255 aaPredicted RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 DEFB127Q9H1M4 99 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 OR52A5Q9H2C5 316 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 PLGRKTQ9HBL7 147 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 MRPL47Q9HD33 250 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 XCL2Q9UBD3 114 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CLN8Q9UBY8 286 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 MTRF1LQ9UGC7 380 aaKnown RBP3.13□□□□□ -1.91
C11orf88-204ENST00000529661 CD300AQ9UGN4 299 aa3.13□□□□□ -1.91
C11orf88-204ENST00000529661 MSH6P52701 1360 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 AKNAQ7Z591 1439 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 SLC31A2O15432 143 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CHST1O43916 411 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 NPIPB7O75200 414 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 IGLV1-47P01700 117 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 DCNP07585 359 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PRPS2P11908 318 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 HPGDP15428 266 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 GPR6P46095 362 aaPredicted RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 RFX3P48380 749 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 UGT2B15P54855 530 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 RAD51Q06609 339 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CDH17Q12864 832 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 RCAN2Q14206 197 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 MRPL23Q16540 153 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 VAX1Q5SQQ9 334 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 RNF165Q6ZSG1 346 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 Q6ZSR3 168 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 ASCL5Q7RTU5 278 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PUSL1Q8N0Z8 303 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 MS4A15Q8N5U1 240 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 LINC00469Q8N7U9 141 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 C8orf31Q8N9H6 132 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 OR4A4PQ8NGN8 299 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 OR2G2Q8NGZ5 317 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF596Q8TC21 504 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PDCD6IPQ8WUM4 868 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 FAM151AQ8WW52 585 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 NDRG1Q92597 394 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 LINC00167Q96N53 147 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CATSPER2Q96P56 530 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 TRNT1Q96Q11 434 aaKnown RBP3.12□□□□□ -1.91
C11orf88-204ENST00000529661 ATP5SQ99766 215 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 ACBD6Q9BR61 282 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 ROGDIQ9GZN7 287 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CWH43Q9H720 699 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 SIAEQ9HAT2 523 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PDFQ9HBH1 243 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CCNB1IP1Q9NPC3 277 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 MYOZ2Q9NPC6 264 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PXMP2Q9NR77 195 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 GPATCH2LQ9NWQ4 482 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 PTTG3PQ9NZH4 202 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 CTSFQ9UBX1 484 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 SLC25A15Q9Y619 301 aa3.12□□□□□ -1.91
C11orf88-204ENST00000529661 UNC13AQ9UPW8 1703 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 MEGF6O75095 1541 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 IGKV6D-21A0A0A0MT36 114 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 PDZK1P1A8MUH7 402 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms