RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NUDT16L1Q9BRJ7 211 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 AURKAIP1Q9NWT8 199 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 IL19Q9UHD0 177 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 PPP1R3CQ9UQK1 317 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 CHST2Q9Y4C5 530 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 DNAH3Q8TD57 4116 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 IGKV1D-42A0A075B6H8 117 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 A0A0G2JPF8 293 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HNRNPCL2B2RXH8 293 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HNRNPCL3B7ZW38 293 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM178BH3BS89 294 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 P2RY10O00398 339 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 PLPP3O14495 311 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 COPEO14579 308 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 SURF4O15260 269 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 XPNPEP2O43895 674 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 ICMTO60725 284 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HNRNPCL1O60812 293 aaKnown RBP9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 C1QCP02747 245 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 MMP7P09237 267 aaPredicted RBP9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HNRNPCL4P0DMR1 293 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 CBLP22681 906 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 STOMP27105 288 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 ECHS1P30084 290 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 SERPINB5P36952 375 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 CRISP3P54108 245 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 BIDP55957 195 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 FGF12P61328 243 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 LRRC74AQ0VAA2 488 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 PCLAFQ15004 111 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HERPUD1Q15011 391 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 MTX3Q5HYI7 312 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 Q6ZTK2 550 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 LDLRAD3Q86YD5 345 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 HIPK4Q8NE63 616 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 OR4K5Q8NGD3 323 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC25A40Q8TBP6 338 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 GATAD2BQ8WXI9 593 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 LRTOMTQ8WZ04 291 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 SGCDQ92629 289 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 NEIL1Q96FI4 390 aaPredicted RBP9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 POM121L2Q96KW2 1035 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 OR2J1Q9GZK6 312 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 CACYBPQ9HB71 228 aaKnown RBP9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 MAN2C1Q9NTJ4 1040 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 P2RX2Q9UBL9 471 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 TBK1Q9UHD2 729 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 PYCARDQ9ULZ3 195 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 TRIM33Q9UPN9 1127 aa9.69□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF816-ZNF321PA0A0X1KG74 233 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 LOC100653049A0A140TA62 436 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 RIPK2O43353 540 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 KRT34O76011 436 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 KRT75O95678 551 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 BGLAPP02818 100 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 LIPFP07098 398 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 RPS2P15880 293 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 CCNOP22674 350 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 TUBG1P23258 451 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 WNT5AP41221 380 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 CLNS1AP54105 237 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 HSF2Q03933 536 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 SPATA46Q5T0L3 261 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 FAM91A1Q658Y4 838 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC27A4Q6P1M0 643 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 ULK3Q6PHR2 472 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF101Q8IZC7 436 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 ANP32BQ92688 251 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF566Q969W8 418 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC25A44Q96H78 314 aaPredicted RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 KCNN2Q9H2S1 579 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 MSL2Q9HCI7 577 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 TUBG2Q9NRH3 451 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 ACOXLQ9NUZ1 547 aa9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 THUMPD1Q9NXG2 353 aaKnown RBP9.68□□□□□ -0.86
AMBRA1-207ENST00000529553 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 C5orf49A4QMS7 147 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 MT-ATP6P00846 226 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 QDPRP09417 244 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 CASQ1P31415 396 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 S100A3P33764 101 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 TGFBR2P37173 567 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 ARHGDIAP52565 204 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 PPP1CBP62140 327 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 HIST3H3Q16695 136 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 ALG10BQ5I7T1 473 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 PABPC1L2AQ5JQF8 200 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 C11orf88Q6PI97 169 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF621Q6ZSS3 439 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC35D2Q76EJ3 337 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 NLRC3Q7RTR2 1065 aa9.67□□□□□ -0.86
AMBRA1-207ENST00000529553 OR8B3Q8NGG8 313 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms